ggKbase home page

DolZOral124_scaffold_1549

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1549_1
Parvimonas sp. oral taxon 393, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116..1450)
-----------------
DNA (1335bp)
protein (445aa)
Peptidase C1-like family n=2 Tax=Parvimonas RepID=A8SNE2_9FIRM rbh
aminopeptidase C rbh
Peptidase C1-like protein {ECO:0000313|EMBL:EGV09638.1}; TaxID=944565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 393 st
DolZOral124_scaffold_1549_2
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1592..2773)
-----------------
DNA (1182bp)
protein (394aa)
Aspartate aminotransferase AspC {ECO:0000313|EMBL:KDR94929.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KDR94929.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
Aspartate aminotransferase n=7 Tax=Clostridium difficile RepID=T2W369_CLODI
aspC; aspartate aminotransferase
DolZOral124_scaffold_1549_3
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

3060..4754
-----------------
DNA (1695bp)
protein (565aa)
Putative uncharacterized protein id=2203019 bin=GWB2_Clostridiales_37_7 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
hypothetical protein
DolZOral124_scaffold_1549_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4767..5465
-----------------
DNA (699bp)
protein (233aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057, ECO:0000313|EMBL:CEN75275.1};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:00
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYP7_9FIRM
DolZOral124_scaffold_1549_5
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5462..5911
-----------------
DNA (450bp)
protein (150aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TPS8_THETC
lipoprotein signal peptidase
DolZOral124_scaffold_1549_6
unknown

Not on your lists

5911..6015
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

DolZOral124_scaffold_1549_7
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6015..6869
-----------------
DNA (855bp)
protein (285aa)
AAA ATPase n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z1F7_9CLOT
AAA ATPase {ECO:0000313|EMBL:CDD37409.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.
DNA polymerase III delta prime subunit
DolZOral124_scaffold_1549_8
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

6866..7765
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6ENQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA91602.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
tpl protein
DolZOral124_scaffold_1549_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7758..8513
-----------------
DNA (756bp)
protein (252aa)
Ribosomal RNA adenine dimethylase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D460_CLODI
Ribosomal RNA adenine dimethylase family protein {ECO:0000313|EMBL:EQF22654.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
methyltransferase
DolZOral124_scaffold_1549_10
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8538..9350
-----------------
DNA (813bp)
protein (271aa)
rsmI; Ribosomal RNA small subunit methyltransferase I (EC:2.1.1.198)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N6X5_9FIRM
DolZOral124_scaffold_1549_11
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9362..10399
-----------------
DNA (1038bp)
protein (346aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ASZ8_THEM3
D-alanine/D-alanine ligase
DolZOral124_scaffold_1549_12
unknown

Not on your lists

10405..10821
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

DolZOral124_scaffold_1549_13
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10824..11270
-----------------
DNA (447bp)
protein (149aa)
Small multidrug export protein (QacE) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CF77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EYE87643.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.
putative small multi-drug export
DolZOral124_scaffold_1549_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11349..12710
-----------------
DNA (1362bp)
protein (454aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TWS6_ALKMQ
Guanine permease {ECO:0000313|EMBL:KGG80023.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
xanthine/uracil/vitamin C permease
DolZOral124_scaffold_1549_15
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12717..13544
-----------------
DNA (828bp)
protein (276aa)
8-oxoguanine-DNA-glycosylase n=1 Tax=Caloramator australicus RC3 RepID=I7KA39_9CLOT
8-oxoguanine-DNA-glycosylase {ECO:0000313|EMBL:CCJ34562.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
8-oxoguanine DNA glycosylase
DolZOral124_scaffold_1549_16
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13528..13899
-----------------
DNA (372bp)
protein (124aa)
Predicted transcriptional regulator n=1 Tax=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) RepID=A5N3P4_CLOK5
hypothetical protein
Predicted transcriptional regulator {ECO:0000313|EMBL:EDK35740.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (s
DolZOral124_scaffold_1549_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13997..14260
-----------------
DNA (264bp)
protein (88aa)
10 kDa chaperonin n=4 Tax=Clostridium butyricum RepID=B1R087_CLOBU
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=997898 speci
DolZOral124_scaffold_1549_18
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14272..15897
-----------------
DNA (1626bp)
protein (542aa)
60 kDa chaperonin n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=CH60_ALKOO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=84022 specie
groEL; chaperonin GroEL
DolZOral124_scaffold_1549_19
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16003..16830)
-----------------
DNA (828bp)
protein (276aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F3S4_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:CDE09934.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp.
hydrolase
DolZOral124_scaffold_1549_20
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16841..18991)
-----------------
DNA (2151bp)
protein (717aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1156417 species="Bacteria; Firmicutes; Clostri
ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CVT7_9CLOT
DolZOral124_scaffold_1549_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18988..19899)
-----------------
DNA (912bp)
protein (304aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Pseudouridine synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CHR2_9CLOT
pseudouridine synthase
DolZOral124_scaffold_1549_22
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19896..20597)
-----------------
DNA (702bp)
protein (234aa)
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0003164DAB
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035261}; Short=MTA/SAH nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684};; Short=MTAN {
DolZOral124_scaffold_1549_23
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20599..20811)
-----------------
DNA (213bp)
protein (71aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJA5_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR46273.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
DolZOral124_scaffold_1549_24
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20815..21486)
-----------------
DNA (672bp)
protein (224aa)
Colicin V production protein n=1 Tax=Clostridium sp. CAG:1219 RepID=R5SYC3_9CLOT
Colicin V production protein {ECO:0000313|EMBL:CCZ55904.1}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr
DolZOral124_scaffold_1549_25
unknown

Not on your lists

comp(21496..22716)
-----------------
DNA (1221bp)
protein (407aa)

This feature has no annotations

DolZOral124_scaffold_1549_26
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22718..23842)
-----------------
DNA (1125bp)
protein (375aa)
Nucleic acid methylase n=1 Tax=Clostridium botulinum C str. Stockholm RepID=F7MP13_CLOBO
Nucleic acid methylase {ECO:0000313|EMBL:KDR96224.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
nucleic acid methylase
DolZOral124_scaffold_1549_27
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23964..24605
-----------------
DNA (642bp)
protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CC74_9CLOT
DolZOral124_scaffold_1549_28
Mycoplasma mycoides, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

24613..26352
-----------------
DNA (1740bp)
protein (580aa)
Uncharacterized protein n=1 Tax=Mycoplasma mycoides subsp. capri LC str. 95010 RepID=F4MR93_MYCML
transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBW54627.1}; TaxID=862259 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma mycoides subsp. capri LC str. 95010.;
DolZOral124_scaffold_1549_29
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26510..27847
-----------------
DNA (1338bp)
protein (446aa)
gdh; NAD-specific glutamate dehydrogenase Gdh (EC:1.4.1.2)
Glutamate dehydrogenase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRI5_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritima
DolZOral124_scaffold_1549_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28106..29623
-----------------
DNA (1518bp)
protein (506aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:CEO23155.1}; EC=2.1.3.1 {ECO:0000313|EMBL:CEO23155.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
Propionyl-CoA carboxylase, beta subunit n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CT99_CLOSO
yqjD; Carboxyl transferase YqjD
Displaying items 1-30 of 38 in total

View Taxonomy