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DolZOral124_scaffold_1568

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1568_1
unknown

Not on your lists

comp(2..175)
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

DolZOral124_scaffold_1568_2
unknown

Not on your lists

482..985
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

DolZOral124_scaffold_1568_3
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(921..1616)
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AY68_9DELT
Pyrimidine dimer DNA glycosylase {ECO:0000313|EMBL:KHE90706.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;"
hypothetical protein
DolZOral124_scaffold_1568_4
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1663..3468)
-----------------
DNA (1806bp)
protein (602aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; Flags: Precursor;; TaxID=1121405 species="Bacteria; Proteobacteria; D
ABC transporter transmembrane region n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TDR6_DESML rbh
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
DolZOral124_scaffold_1568_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3498..3938)
-----------------
DNA (441bp)
protein (147aa)
Methyltransferase type 11 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0A3_9FIRM
Methyltransferase type 11 {ECO:0000313|EMBL:CDE82070.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminoc
methyltransferase type 11
DolZOral124_scaffold_1568_6
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4477..5181)
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TF47_DESML
Uncharacterized protein {ECO:0000313|EMBL:EPR35331.1}; Flags: Precursor;; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;"
hypothetical protein
DolZOral124_scaffold_1568_7
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5178..6425)
-----------------
DNA (1248bp)
protein (416aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1121405 species="B
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TFG7_DESML
DolZOral124_scaffold_1568_8
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6436..7413)
-----------------
DNA (978bp)
protein (326aa)
Oxidoreductase domain protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UMY6_DESML rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:EPR35329.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desul
oxidoreductase domain-containing protein
DolZOral124_scaffold_1568_9
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7443..8213)
-----------------
DNA (771bp)
protein (257aa)
lpxA; protein LpxA (EC:2.3.1.129)
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7USS0_DESML rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
DolZOral124_scaffold_1568_10
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8210..8692)
-----------------
DNA (483bp)
protein (161aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-(acyl-carrier-protein) dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TDR2_DESML
DolZOral124_scaffold_1568_11
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8689..9756)
-----------------
DNA (1068bp)
protein (356aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulf
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TF43_DESML
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
DolZOral124_scaffold_1568_12
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9740..10291)
-----------------
DNA (552bp)
protein (184aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TFG3_DESML
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:EPR35325.1}; Flags: Precursor;; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desul
outer membrane protein (putative Skp protein)
DolZOral124_scaffold_1568_13
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10391..13117)
-----------------
DNA (2727bp)
protein (909aa)
Outer membrane protein assembly factor BamA n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UMY2_DESML rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; D
outer membrane protein assembly complex, YaeT protein
DolZOral124_scaffold_1568_14
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13114..13839)
-----------------
DNA (726bp)
protein (242aa)
lolD3; protein LolD3 (EC:3.6.3.25)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacte
LolD3 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QEJ6_DESAH
DolZOral124_scaffold_1568_15
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13829..15124)
-----------------
DNA (1296bp)
protein (432aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TDQ6_DESML
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:EPR35322.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacter
lolC; protein LolC
DolZOral124_scaffold_1568_16
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15165..16655)
-----------------
DNA (1491bp)
protein (497aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TF40_DESML rbh
lysyl-tRNA synthetase
DolZOral124_scaffold_1568_17
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16798..17310)
-----------------
DNA (513bp)
protein (171aa)
CheC domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QE96_DESB2
cheX2; protein CheX2; K03409 chemotaxis protein CheX Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
chemotaxis protein CheC
DolZOral124_scaffold_1568_18
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17370..17798)
-----------------
DNA (429bp)
protein (143aa)
Response regulator receiver protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQN3_DESBD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACU91539.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" sou
DolZOral124_scaffold_1568_19
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17860..18246)
-----------------
DNA (387bp)
protein (129aa)
Response regulator receiver protein n=2 Tax=Desulfovibrio RepID=G7Q464_9DELT
Response regulator receiver protein {ECO:0000313|EMBL:EHJ46854.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source
response regulator receiver protein
DolZOral124_scaffold_1568_20
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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18835..19353
-----------------
DNA (519bp)
protein (173aa)
Chemotaxis protein cheW n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YGW3_9DELT
Chemotaxis protein cheW {ECO:0000313|EMBL:CBX29807.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental sampl
cheW; chemotaxis protein CheW CheW
DolZOral124_scaffold_1568_21
unknown

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19419..19547
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

DolZOral124_scaffold_1568_22
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19608..22304
-----------------
DNA (2697bp)
protein (899aa)
cheA; chemotaxis protein CheA (EC:2.7.13.3); K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=RBG_13_Deltaproteobacteria_47_9_curated
cheA; chemotaxis protein CheA (EC:2.7.13.3)
Chemotaxis protein CheA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A592_GEMAT rbh
DolZOral124_scaffold_1568_23
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22319..23122
-----------------
DNA (804bp)
protein (268aa)
cheR; chemotaxis protein methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A594_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:KGM42768.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
DolZOral124_scaffold_1568_24
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

23211..23684
-----------------
DNA (474bp)
protein (158aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spiroc
CheD, stimulates methylation of MCP protein; K03411 chemotaxis protein CheD [EC:3.5.1.44] id=125333 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
CheD, stimulates methylation of MCP protein
DolZOral124_scaffold_1568_25
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

23732..24130
-----------------
DNA (399bp)
protein (133aa)
Chemotaxis protein CheY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A596_GEMAT
Chemotaxis protein CheY {ECO:0000313|EMBL:KGM42764.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
cheY; chemotaxis protein CheY
DolZOral124_scaffold_1568_26
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

24114..24623
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGM42763.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
Putative uncharacterized protein id=3692807 bin=GWF2_Lentisphaerae_57_35 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
DolZOral124_scaffold_1568_27
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

24623..25687
-----------------
DNA (1065bp)
protein (355aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1329640 species="Bacteria; Spirochaetes; Spiroch
cheB; chemotaxis response regulator protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A598_GEMAT rbh
DolZOral124_scaffold_1568_28
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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25802..27190
-----------------
DNA (1389bp)
protein (463aa)
RNA methyltransferase, TrmA family n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7VJV9_DESML
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:EPR44838.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="
RNA methyltransferase
DolZOral124_scaffold_1568_29
unknown

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27214..29568
-----------------
DNA (2355bp)
protein (785aa)

This feature has no annotations

DolZOral124_scaffold_1568_30
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(29582..30211)
-----------------
DNA (630bp)
protein (210aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1121405 species="Bacteria; Proteobacteria; Del
Thymidylate kinase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TCB5_DESML
dTMP kinase
Displaying items 1-30 of 35 in total

View Taxonomy