ggKbase home page

DolZOral124_scaffold_1577

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1577_1
unknown

Not on your lists

3..164
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

DolZOral124_scaffold_1577_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

161..1309
-----------------
DNA (1149bp)
protein (383aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1156417 species="Bacteri
Cysteine desulfurase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LSF0_CLOB8
aminotransferase, class V
DolZOral124_scaffold_1577_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1574..2662
-----------------
DNA (1089bp)
protein (363aa)
mnmA; transfer RNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Clostridium difficile RepID=T2YGI6_CLODI
DolZOral124_scaffold_1577_4
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2672..5293
-----------------
DNA (2622bp)
protein (874aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRV7_CLOSD
DolZOral124_scaffold_1577_5
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5426..5704
-----------------
DNA (279bp)
protein (93aa)
UPF0297 protein BN559_00357 n=1 Tax=Clostridium sp. CAG:245 RepID=R6C0U4_9CLOT
UPF0297 protein Y919_00470 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azo
yrzL; hypothetical protein
DolZOral124_scaffold_1577_6
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5704..6135
-----------------
DNA (432bp)
protein (144aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1161902 speci
Putative Holliday junction resolvase n=1 Tax=planctomycete KSU-1 RepID=I3ILA4_9PLAN
RNAse H-fold protein YqgF
DolZOral124_scaffold_1577_7
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6137..6361
-----------------
DNA (225bp)
protein (75aa)
UPF0473 protein HMPREF0389_00965 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor aloci
DolZOral124_scaffold_1577_8
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6421..6855
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WF18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01636.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
ferric uptake regulator family protein
DolZOral124_scaffold_1577_9
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6882..8546
-----------------
DNA (1665bp)
protein (555aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Clostridium sp. CAG:440 RepID=R7GDM9_9CLOT
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:CDE25121.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sou
RNA-metabolising metallo-beta-lactamase
DolZOral124_scaffold_1577_10
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8893..9915
-----------------
DNA (1023bp)
protein (341aa)
Aminodeoxychorismate lyase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T8N4_THEIA
aminodeoxychorismate lyase
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_1577_11
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9916..10560
-----------------
DNA (645bp)
protein (215aa)
S-adenosylmethionine-dependent methyltransferase n=3 Tax=Clostridium acetobutylicum RepID=F0K5C3_CLOAE
S-adenosylmethionine-dependent methyltransferase
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AAK79652.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
DolZOral124_scaffold_1577_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10874..12106
-----------------
DNA (1233bp)
protein (411aa)
Peptidase, U32 family n=9 Tax=Clostridium difficile RepID=G6B7S7_CLODI
Peptidase U32 {ECO:0000313|EMBL:KGG81460.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
U32 family peptidase
DolZOral124_scaffold_1577_13
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12169..12435
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJ92_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA48655.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
DolZOral124_scaffold_1577_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12966..16202
-----------------
DNA (3237bp)
protein (1079aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium sp. CAG:798 RepID=R6XAK8_9CLOT
ATP-dependent nuclease subunit B
DolZOral124_scaffold_1577_15
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16189..19521
-----------------
DNA (3333bp)
protein (1111aa)
addA; ATP-dependent helicase/deoxyribonuclease, subunit A (EC:3.6.1.-)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B070_CLOA9
DolZOral124_scaffold_1577_16
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19983..21014
-----------------
DNA (1032bp)
protein (344aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MF49_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18718.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
DolZOral124_scaffold_1577_17
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21368..22327
-----------------
DNA (960bp)
protein (320aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=B8J4U6_DESDA
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACL50226.1}; TaxID=525146 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" so
DolZOral124_scaffold_1577_18
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

22347..24026
-----------------
DNA (1680bp)
protein (560aa)
von Willebrand factor domain protein n=1 Tax=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 RepID=A5TXN4_FUSNP
Uncharacterized protein {ECO:0000313|EMBL:ETZ29212.1}; TaxID=1357398 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum 13_3C.;"
von Willebrand factor type A
DolZOral124_scaffold_1577_19
unknown

Not on your lists

24044..24730
-----------------
DNA (687bp)
protein (229aa)

This feature has no annotations

DolZOral124_scaffold_1577_20
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24741..25994
-----------------
DNA (1254bp)
protein (418aa)
peptidoglycan-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289A64E
Uncharacterized protein {ECO:0000313|EMBL:EFM25030.1}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BA
exported protein of unknown function
DolZOral124_scaffold_1577_21
unknown

Not on your lists

comp(26033..27913)
-----------------
DNA (1881bp)
protein (627aa)

This feature has no annotations

DolZOral124_scaffold_1577_22
Enterococcus dispar, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28047..29165
-----------------
DNA (1119bp)
protein (373aa)
Uncharacterized protein n=1 Tax=Enterococcus dispar ATCC 51266 RepID=S1NC85_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOT40927.1}; TaxID=1139219 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus dispar ATCC 51266.;"
DolZOral124_scaffold_1577_23
Lactobacillus hominis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29189..30925
-----------------
DNA (1737bp)
protein (579aa)
Uncharacterized protein n=1 Tax=Lactobacillus hominis CRBIP 24.179 RepID=I7IVN7_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCI81763.1}; TaxID=1423758 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus hominis DSM 23910
DolZOral124_scaffold_1577_24
Sneathia sp. Sn35, Sneathia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

31248..32348
-----------------
DNA (1101bp)
protein (367aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TU33_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC95827.1}; TaxID=1069640 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sneathia.;" source="Sneathia sp. Sn35.;"
monogalactosyldiacylglycerol synthase
DolZOral124_scaffold_1577_25
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32499..33359
-----------------
DNA (861bp)
protein (287aa)
aminoglycoside phosphotransferase n=1 Tax=Fluoribacter dumoffii RepID=UPI00030BBBB3
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AJC22594.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pu
DolZOral124_scaffold_1577_26
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33567..35579)
-----------------
DNA (2013bp)
protein (671aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myx
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
GAF sensor hybrid histidine kinase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M6U9_METRJ
Displaying 26 items

View Taxonomy