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DolZOral124_scaffold_1578

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1578_1
unknown

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comp(1..141)
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

DolZOral124_scaffold_1578_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(138..1016)
-----------------
DNA (879bp)
protein (293aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CZV5_HALOH
Uncharacterized protein {ECO:0000313|EMBL:KGT75352.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
binding-protein-dependent transport system inner membrane protein
DolZOral124_scaffold_1578_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1038..2312)
-----------------
DNA (1275bp)
protein (425aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NNT5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KGT75351.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
sugar ABC transporter substrate-binding protein
DolZOral124_scaffold_1578_4
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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2512..3306
-----------------
DNA (795bp)
protein (265aa)
Putative IclR family transcriptional regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8E4_CALAS
putative IclR family transcriptional regulator Tax=RBG_16_Chloroflexi_57_11_curated
putative IclR family transcriptional regulator
DolZOral124_scaffold_1578_5
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3333..4241)
-----------------
DNA (909bp)
protein (303aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI0003614E5A
Uncharacterized protein {ECO:0000313|EMBL:KGM42844.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
hypothetical protein
DolZOral124_scaffold_1578_6
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4313..6016)
-----------------
DNA (1704bp)
protein (568aa)
Sensor diguanylate cyclase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJS4_ACEWD
sensor diguanylate cyclase
Sensor diguanylate cyclase {ECO:0000313|EMBL:AFA47475.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain
DolZOral124_scaffold_1578_7
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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6336..7076
-----------------
DNA (741bp)
protein (247aa)
exodeoxyribonuclease III Xth (EC:4.2.99.18)
Exodeoxyribonuclease III n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U1GW70_TRESO
Exodeoxyribonuclease III {ECO:0000313|EMBL:KGM42845.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
DolZOral124_scaffold_1578_8

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7102..7665
-----------------
DNA (564bp)
protein (188aa)
Isochorismatase family protein n=2 Tax=Peptoniphilus RepID=E0NNM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKK57608.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
isochorismatase hydrolase
DolZOral124_scaffold_1578_9
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(7687..9621)
-----------------
DNA (1935bp)
protein (645aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1329640 species="Bacteria;
Primosomal protein N' id=3117059 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
primosomal protein N''
DolZOral124_scaffold_1578_10
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(9596..10522)
-----------------
DNA (927bp)
protein (309aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RPI5_SPITD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN02767.1}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972
DolZOral124_scaffold_1578_11
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(10497..11258)
-----------------
DNA (762bp)
protein (254aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YEX5_TREAZ
DolZOral124_scaffold_1578_12
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(11248..12102)
-----------------
DNA (855bp)
protein (285aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI0003601229
Uncharacterized protein {ECO:0000313|EMBL:KGM44146.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
hypothetical protein
DolZOral124_scaffold_1578_13
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(12104..12475)
-----------------
DNA (372bp)
protein (124aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
Holo-[acyl-carrier-protein] synthase n=3 Tax=Treponema denticola RepID=M2D030_TREDN
4'-phosphopantetheinyl transferase
DolZOral124_scaffold_1578_14
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(12475..13428)
-----------------
DNA (954bp)
protein (318aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00035EB44B
Uncharacterized protein {ECO:0000313|EMBL:KGM44145.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
YbbR family protein
DolZOral124_scaffold_1578_15
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(13425..14219)
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WJM5_9SPIO rbh
Membrane protein {ECO:0000313|EMBL:KGM44144.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
hypothetical protein
DolZOral124_scaffold_1578_16
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(14216..15058)
-----------------
DNA (843bp)
protein (281aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RPJ1_SPITD
Uncharacterized protein {ECO:0000313|EMBL:KGM44143.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
DolZOral124_scaffold_1578_17
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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15206..16366
-----------------
DNA (1161bp)
protein (387aa)
Uncharacterized protein TP_0466 id=3630284 bin=GWB1_CP_36_13 species=unknown genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein Tax=GWB1_Spirochaetes_36_13_curated
hypothetical protein
DolZOral124_scaffold_1578_18
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16371..17057)
-----------------
DNA (687bp)
protein (229aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1U9_SPICH
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
DolZOral124_scaffold_1578_19
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17063..17986)
-----------------
DNA (924bp)
protein (308aa)
Arsenical pump-driving ATPase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JIF4_THEKO
Oxyanion-translocating ATPase
Tax=BJP_IG2102_Syntrophobacterales_60_12
DolZOral124_scaffold_1578_20
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18001..18348)
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein n=1 Tax=Thermococcus zilligii RepID=UPI00029AC964
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
DolZOral124_scaffold_1578_21
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18351..20072)
-----------------
DNA (1722bp)
protein (574aa)
Carbon starvation protein CstA n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R3V0_SPISS
carbon starvation protein CstA
Tax=BJP_IG2102_Syntrophobacterales_60_12
DolZOral124_scaffold_1578_22
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20152..21282)
-----------------
DNA (1131bp)
protein (377aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RR20_SPITD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN01598.1}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972
DolZOral124_scaffold_1578_23
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21295..21567)
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1V0_SPICH
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
DolZOral124_scaffold_1578_24
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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21612..23342
-----------------
DNA (1731bp)
protein (577aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CVW0_HALOH
Fis family sigma-54 specific transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ACL69429.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" sour
DolZOral124_scaffold_1578_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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23413..24819
-----------------
DNA (1407bp)
protein (469aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQT6_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
putative sodium/solute symporter
DolZOral124_scaffold_1578_26
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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24980..26071
-----------------
DNA (1092bp)
protein (364aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:00002
buk2; butyrate kinase 1 (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSF7_9CLOT
DolZOral124_scaffold_1578_27
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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26068..26763
-----------------
DNA (696bp)
protein (232aa)
Putative ATP/GTP-binding protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJG2_ALKOO
putative ATP/GTP-binding protein
Putative ATP/GTP-binding protein {ECO:0000313|EMBL:ABW19944.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (
DolZOral124_scaffold_1578_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26735..26974
-----------------
DNA (240bp)
protein (80aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z740_9CLOT
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:CCQ93554.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
4Fe-4S ferredoxin, iron-sulfur binding domain protein
DolZOral124_scaffold_1578_29
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26982..28049
-----------------
DNA (1068bp)
protein (356aa)
vorB; ketoisovalerate oxidoreductase subunit VorB (EC:1.2.7.7)
Ketoisovalerate oxidoreductase subunit VorB {ECO:0000313|EMBL:AHM57131.1}; EC=1.2.7.7 {ECO:0000313|EMBL:AHM57131.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteria
Ketoisovalerate oxidoreductase subunit vorB n=1 Tax=Clostridium ultunense Esp RepID=M1YSM0_9CLOT
DolZOral124_scaffold_1578_30
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28049..28819
-----------------
DNA (771bp)
protein (257aa)
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TW10_ALKMQ
2-oxoglutarate oxidoreductase {ECO:0000313|EMBL:KJF25495.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
thiamine pyrophosphate binding domain-containing protein
Displaying items 1-30 of 39 in total

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