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DolZOral124_scaffold_1583

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1583_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(824..1747)
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K8E9_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK95915.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
DolZOral124_scaffold_1583_2
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3028..3957)
-----------------
DNA (930bp)
protein (310aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CM34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99770.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
DolZOral124_scaffold_1583_3
unknown

Not on your lists

5566..5745
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

DolZOral124_scaffold_1583_4
unknown

Not on your lists

6062..6178
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

DolZOral124_scaffold_1583_5
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

6414..7307
-----------------
DNA (894bp)
protein (298aa)
Uncharacterized protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DST5_METV3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI36195.1}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (str
DolZOral124_scaffold_1583_6
Methanococcus vannielii, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

7304..8983
-----------------
DNA (1680bp)
protein (560aa)
CRISPR-associated protein, Crm2 family n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UNE7_METVS
CRISPR-associated RAMP Crm2 family protein
CRISPR-associated protein, Crm2 family {ECO:0000313|EMBL:ABR54019.1}; TaxID=406327 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococ
DolZOral124_scaffold_1583_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8983..10074
-----------------
DNA (1092bp)
protein (364aa)
CRISPR-associated protein Cmr3 n=1 Tax=Clostridium sp. JC122 RepID=UPI0002886DE8
Putative CRISPR-associated protein {ECO:0000313|EMBL:BAQ13949.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
cmr3; CRISPR-associated Cmr3 family protein
DolZOral124_scaffold_1583_8
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10088..10948
-----------------
DNA (861bp)
protein (287aa)
CRISPR-associated RAMP protein, Cmr4 family n=1 Tax=Streptococcus mitis bv. 2 str. SK95 RepID=F9LXT6_STRMT
CRISPR-associated RAMP protein, Cmr4 family {ECO:0000313|EMBL:EGU65455.1}; TaxID=1000588 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococc
CRISPR-associated RAMP protein, Cmr4 family
DolZOral124_scaffold_1583_9
unknown

Not on your lists

10945..11343
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

DolZOral124_scaffold_1583_10
Streptococcus sp. oral taxon 058, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11364..12122
-----------------
DNA (759bp)
protein (253aa)
CRISPR-associated RAMP protein, Cmr6 family n=1 Tax=Streptococcus sp. oral taxon 058 str. F0407 RepID=G6CA42_9STRE
CRISPR-associated RAMP protein, Cmr6 family {ECO:0000313|EMBL:EHI76530.1}; TaxID=861455 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcu
CRISPR-associated RAMP protein, Cmr6 family
DolZOral124_scaffold_1583_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12091..13599
-----------------
DNA (1509bp)
protein (503aa)
Putative uncharacterized protein n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UNF2_METVS
Uncharacterized protein {ECO:0000313|EMBL:KGM98501.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5
hypothetical protein
DolZOral124_scaffold_1583_12
Thermodesulfobacterium commune, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(13616..14386)
-----------------
DNA (771bp)
protein (257aa)
CRISPR-associated protein Cas6 n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=A7HMV7_FERNB
hypothetical protein
CRISPR-associated endoribonuclease {ECO:0000256|PIRNR:PIRNR005054}; TaxID=289377 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;
DolZOral124_scaffold_1583_13
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(14346..15731)
-----------------
DNA (1386bp)
protein (462aa)
DacC; D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=GWB2_Clostridiales_37_7_curated
dacF3; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase id=1818254 bin=GWB2_Clostridiales_37_7 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
DolZOral124_scaffold_1583_14
Synergistes jonesii, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

16642..18039
-----------------
DNA (1398bp)
protein (466aa)
High-affinity Fe2+/Pb2+ permease n=3 Tax=Jonquetella RepID=H0UKU2_9BACT
Iron permease {ECO:0000313|EMBL:KEJ92314.1}; TaxID=2754 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes jonesii.;"
High-affinity Fe2+/Pb2+ permease
DolZOral124_scaffold_1583_15
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

18154..18870
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y691_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB90141.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W54
Uncharacterized protein probably involved in high-affinity Fe2+ transport
DolZOral124_scaffold_1583_16
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

18878..20152
-----------------
DNA (1275bp)
protein (425aa)
Uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y690_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB90140.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W54
hypothetical protein
DolZOral124_scaffold_1583_17
Synergistes jonesii, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

20156..21430
-----------------
DNA (1275bp)
protein (425aa)
Efflux ABC transporter, permease protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y689_9BACT
ABC transporter permease {ECO:0000313|EMBL:KEJ92311.1}; TaxID=2754 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes jonesii.;"
ABC transporter permease
DolZOral124_scaffold_1583_18
Fusobacterium periodonticum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21436..22638
-----------------
DNA (1203bp)
protein (401aa)
Efflux ABC transporter, permease protein n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=D4CS16_9FUSO
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFE87833.1}; TaxID=546275 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium periodon
ABC transporter permease
DolZOral124_scaffold_1583_19
Synergistes jonesii, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

22640..23326
-----------------
DNA (687bp)
protein (229aa)
ABC transporter, ATP-binding protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y687_9BACT
GTPase {ECO:0000313|EMBL:KEJ92309.1}; TaxID=2754 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes jonesii.;"
ABC transporter ATP-binding protein
DolZOral124_scaffold_1583_20
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23326..23715
-----------------
DNA (390bp)
protein (130aa)
FMN-binding domain protein n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R070_CLOB3
FMN-binding domain-containing protein
FMN-binding domain protein {ECO:0000313|EMBL:ADC91027.1}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (st
DolZOral124_scaffold_1583_21
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

23942..24388
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=3 Tax=Jonquetella RepID=C9M854_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEX48338.1}; TaxID=645512 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi E3_33 E1.;
DolZOral124_scaffold_1583_22
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24381..25586
-----------------
DNA (1206bp)
protein (402aa)
Efflux ABC transporter, permease protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SN54_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDP23748.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra
ABC transporter permease
DolZOral124_scaffold_1583_23
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25595..26275
-----------------
DNA (681bp)
protein (227aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WQ67_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF38581.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9
ABC transporter ATP-binding protein
DolZOral124_scaffold_1583_24
unknown

Not on your lists

26434..26688
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

DolZOral124_scaffold_1583_25
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26698..27009
-----------------
DNA (312bp)
protein (104aa)
UPF0145 protein CAAU_0047 n=1 Tax=Caloramator australicus RC3 RepID=G0V3K7_9CLOT
UPF0145 protein CAAU_0047 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;
hypothetical protein
DolZOral124_scaffold_1583_26
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

27329..29425
-----------------
DNA (2097bp)
protein (699aa)
ptrB; protease II (EC:3.4.21.83)
OpdB protein n=2 Tax=Treponema denticola RepID=E9S340_TREDN
OpdB protein {ECO:0000313|EMBL:EGC77592.1}; TaxID=699187 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola F0402.;"
DolZOral124_scaffold_1583_27
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29592..29933
-----------------
DNA (342bp)
protein (114aa)
UPF0122 protein HSACCH_01222 n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E131_9FIRM
helix-turn-helix protein YlxM/p13 family protein
UPF0122 protein HSACCH_01222 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium sacch
DolZOral124_scaffold_1583_28
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29943..31295
-----------------
DNA (1353bp)
protein (451aa)
Signal recognition particle protein n=7 Tax=Clostridium thermocellum RepID=A3DDH6_CLOTH
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Rumi
DolZOral124_scaffold_1583_29
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31354..31602
-----------------
DNA (249bp)
protein (83aa)
30S ribosomal protein S16 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=RS16_ALKMQ
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens
DolZOral124_scaffold_1583_30
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31615..31854
-----------------
DNA (240bp)
protein (80aa)
UPF0109 protein BN648_02577 n=1 Tax=Clostridium sp. CAG:411 RepID=R7I5G2_9CLOT
UPF0109 protein BN648_02577 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clo
hypothetical protein
Displaying items 1-30 of 35 in total

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