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DolZOral124_scaffold_1588

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1588_1
Shewanella xiamenensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221..934)
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7U1B6_PSEME
Uncharacterized protein {ECO:0000313|EMBL:KEK28612.1}; TaxID=332186 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella xiamenensi
hypothetical protein
DolZOral124_scaffold_1588_2
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(934..2385)
-----------------
DNA (1452bp)
protein (484aa)
UPI0003CE6BB4 related cluster n=1 Tax=unknown RepID=UPI0003CE6BB4 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ97250.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynu
DolZOral124_scaffold_1588_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2477..3259)
-----------------
DNA (783bp)
protein (261aa)
ABC-2 type transporter superfamily n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N2X1_9GAMM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Co
multidrug ABC transporter permease
DolZOral124_scaffold_1588_4
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3256..4188)
-----------------
DNA (933bp)
protein (311aa)
ABC transporter related n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R9D3_KANKD
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACV26024.1}; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensi
DolZOral124_scaffold_1588_5
Alteromonas sp. SN2, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4227..4889)
-----------------
DNA (663bp)
protein (221aa)
electron transporter RsxE n=1 Tax=Gilvimarinus chinensis RepID=UPI000367BC83
NADH-ubiquinone oxidoreductase
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=715451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="A
DolZOral124_scaffold_1588_6
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4910..5776)
-----------------
DNA (867bp)
protein (289aa)
Sec-independent protein translocase protein TatC n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZBU0_9GAMM
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardioba
tatC; sec-independent protein translocase TatC
DolZOral124_scaffold_1588_7
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5769..6278)
-----------------
DNA (510bp)
protein (170aa)
Sec-independent protein translocase protein TatB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9Q2_9GAMM
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriale
twin-arginine translocation protein subunit TatB
DolZOral124_scaffold_1588_8
Salinivibrio sp. KP-1, Salinivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6291..6515)
-----------------
DNA (225bp)
protein (75aa)
Sec-independent protein translocase protein TatA n=2 Tax=Vibrio RepID=C9Q2V6_9VIBR
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1406902 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Salinivibrio.;" sou
tatA; twin arginine translocase protein A
DolZOral124_scaffold_1588_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6575..6904)
-----------------
DNA (330bp)
protein (110aa)
phosphoribosyl-ATP pyrophosphohydrolase; K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] Tax=CG_Thiomicrospira_01
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00037FF20F
DolZOral124_scaffold_1588_10
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6917..7339)
-----------------
DNA (423bp)
protein (141aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KPL0_SIMAS
phosphoribosyl-AMP cyclohydrolase
DolZOral124_scaffold_1588_11
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7360..8145)
-----------------
DNA (786bp)
protein (262aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2FXM0_OCESG
methionine aminopeptidase
DolZOral124_scaffold_1588_12
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

8239..9069
-----------------
DNA (831bp)
protein (277aa)
GumN protein n=2 Tax=Dictyoglomus thermophilum RepID=B5YA85_DICT6
GumN protein
GumN protein {ECO:0000313|EMBL:ACI19578.1}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 396
DolZOral124_scaffold_1588_13
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9219..10682
-----------------
DNA (1464bp)
protein (488aa)
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A2B1E9
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
inositol-5-monophosphate dehydrogenase
DolZOral124_scaffold_1588_14
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

10752..11366
-----------------
DNA (615bp)
protein (205aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO
Xanthine phosphoribosyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5Y2_CALAS
xpt; xanthine phosphoribosyltransferase
DolZOral124_scaffold_1588_15
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11405..12025
-----------------
DNA (621bp)
protein (207aa)
Lipoprotein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T465_META2
hypothetical protein
Lipoprotein {ECO:0000313|EMBL:CCE23802.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcalip
DolZOral124_scaffold_1588_16
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12235..12750
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DV36_THIND
protein of unknown function DUF1566
Uncharacterized protein {ECO:0000313|EMBL:AGA32873.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkal
DolZOral124_scaffold_1588_17
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12786..13061
-----------------
DNA (276bp)
protein (92aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3ATT9_CHLCH
Uncharacterized protein {ECO:0000313|EMBL:KIF26017.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
hypothetical protein
DolZOral124_scaffold_1588_18
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13058..13552
-----------------
DNA (495bp)
protein (165aa)
Nucleic acid-binding protein contains PIN domain-like protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TLN8_MARTH
nucleic acid-binding protein contains pin domain-like protein
Nucleic acid-binding protein contains PIN domain-like protein {ECO:0000313|EMBL:ADR22342.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" sou
DolZOral124_scaffold_1588_19
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13577..15145
-----------------
DNA (1569bp)
protein (523aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GQ52_HAEHA
GMP synthetase
DolZOral124_scaffold_1588_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15345..15677
-----------------
DNA (333bp)
protein (111aa)
Chorismate mutase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA16_9BURK
PchB_1 protein {ECO:0000313|EMBL:KIR22342.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
chorismate mutase
DolZOral124_scaffold_1588_21
Ferrimonas balearica, Ferrimonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15687..16751
-----------------
DNA (1065bp)
protein (355aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=550540 species="Bacteria; Proteob
Alanine racemase n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SWP5_FERBD rbh
DolZOral124_scaffold_1588_22
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16929..17765)
-----------------
DNA (837bp)
protein (279aa)
integral membrane protein TerC n=1 Tax=Kangiella aquimarina RepID=UPI000376783F
Integral membrane protein TerC {ECO:0000313|EMBL:AKE51448.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella g
integral membrane protein TerC
DolZOral124_scaffold_1588_23
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17923..18693)
-----------------
DNA (771bp)
protein (257aa)
3''''-5'''' exonuclease n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EA2DC
conserved protein of unknown function
Tax=BJP_IG2102_Gammaproteobacteria_62_140
DolZOral124_scaffold_1588_24
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18700..19605)
-----------------
DNA (906bp)
protein (302aa)
Peptide ABC transporter permease protein n=8 Tax=Vibrio mimicus RepID=D0GVM6_VIBMI
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIL32853.1}; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="Basilea psittacipulmoni
DolZOral124_scaffold_1588_25
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19618..20547)
-----------------
DNA (930bp)
protein (310aa)
Peptide ABC transporter permease n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2FZ47_OCESG
peptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:AEY00923.1}; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Oceanimonas.;" source="Oceanimonas s
DolZOral124_scaffold_1588_26
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20602..21030)
-----------------
DNA (429bp)
protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LJU3_9GAMM
twitching motility protein PilT
DolZOral124_scaffold_1588_27
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21030..21293)
-----------------
DNA (264bp)
protein (88aa)
Putative virulence-associated protein n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LJU4_9GAMM
Putative virulence-associated protein {ECO:0000313|EMBL:EGG92851.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
virulence associated protein VapB
DolZOral124_scaffold_1588_28
Vibrio fluvialis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21407..22963)
-----------------
DNA (1557bp)
protein (519aa)
Dipeptide-binding ABC transporter, periplasmic substrate-binding component n=2 Tax=Vibrio fluvialis RepID=S7HW03_VIBFL
Dipeptide-binding ABC transporter {ECO:0000313|EMBL:EPP19131.1}; TaxID=1336752 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio fluvialis PG4
cytochrome C
DolZOral124_scaffold_1588_29
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23212..24930)
-----------------
DNA (1719bp)
protein (573aa)
ABC transporter ATPase n=1 Tax=Aeromonas caviae RepID=UPI0002197E3A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKC97984.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacter
putative peptide ABC transporter, ATP-binding protein
DolZOral124_scaffold_1588_30
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25194..26159
-----------------
DNA (966bp)
protein (322aa)
Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EWW7_DICNV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ14012.1}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dichelobacte
Displaying items 1-30 of 38 in total

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