ggKbase home page

DolZOral124_scaffold_1596

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1596_1
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..2151
-----------------
DNA (2151bp)
protein (717aa)
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J8N0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN99105.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
hypothetical protein
DolZOral124_scaffold_1596_2
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2154..2762
-----------------
DNA (609bp)
protein (203aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAC1_9PORP
DolZOral124_scaffold_1596_3
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2857..5787)
-----------------
DNA (2931bp)
protein (977aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales
Glycine dehydrogenase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9K0_9PORP rbh
gcvP; glycine dehydrogenase
DolZOral124_scaffold_1596_4
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5792..6445)
-----------------
DNA (654bp)
protein (218aa)
Metallo-beta-lactamase domain protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9K1_9PORP
Metallo-beta-lactamase {ECO:0000313|EMBL:KGN99043.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis
metallo-beta-lactamase
DolZOral124_scaffold_1596_5
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6458..7096)
-----------------
DNA (639bp)
protein (213aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
rsmG; Ribosomal RNA small subunit methyltransferase G (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9K2_9PORP
DolZOral124_scaffold_1596_6
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8118..11006
-----------------
DNA (2889bp)
protein (963aa)
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J7Q1_9PORP rbh
Kinase {ECO:0000313|EMBL:KGN97777.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
hypothetical protein
DolZOral124_scaffold_1596_7
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11033..11728
-----------------
DNA (696bp)
protein (232aa)
Peptidase, S54 family n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J7Q2_9PORP
Membrane protein {ECO:0000313|EMBL:KGN97776.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
membrane protein
DolZOral124_scaffold_1596_8
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11725..12600
-----------------
DNA (876bp)
protein (292aa)
Peptidase, S54 family n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J7Q3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN97775.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
rhomboid family protein
DolZOral124_scaffold_1596_9
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12597..13790
-----------------
DNA (1194bp)
protein (398aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J7Q4_9PORP
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEN83669.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" sourc
hypothetical protein
DolZOral124_scaffold_1596_10
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13794..14732
-----------------
DNA (939bp)
protein (313aa)
Putative membrane protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J7Q5_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN97773.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
hypothetical protein
DolZOral124_scaffold_1596_trna_2
unknown

Not on your lists

comp(14742..14815)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1596_11
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14863..15501)
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI000362DD83
Uncharacterized protein {ECO:0000313|EMBL:EEN83783.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontali
hypothetical protein
DolZOral124_scaffold_1596_12
unknown

Not on your lists

comp(15477..15869)
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

DolZOral124_scaffold_1596_13
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16085..17068
-----------------
DNA (984bp)
protein (328aa)
Trans-hexaprenyltranstransferase (EC:2.5.1.30)
Polyprenyl synthetase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MDB8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN97772.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
DolZOral124_scaffold_1596_14
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17169..17879
-----------------
DNA (711bp)
protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9M4_9PORP
pyrH; uridylate kinase
DolZOral124_scaffold_1596_15
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17907..18470
-----------------
DNA (564bp)
protein (188aa)
Ribosome-recycling factor n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9M5_9PORP
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=266762 species="Bacteria;
frr; ribosome recycling factor
DolZOral124_scaffold_1596_16
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18491..19471
-----------------
DNA (981bp)
protein (327aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Po
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9M6_9PORP
ribosome-associated GTPase
DolZOral124_scaffold_1596_17
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19486..21687
-----------------
DNA (2202bp)
protein (734aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=266762 species="Bacteria; Bacteroidetes; Bacte
Ribonuclease R n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9M7_9PORP
ribonuclease R
DolZOral124_scaffold_1596_18
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21702..22760
-----------------
DNA (1059bp)
protein (353aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9M8_9PORP
ribosomal RNA large subunit methyltransferase N
DolZOral124_scaffold_1596_19
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22951..24450
-----------------
DNA (1500bp)
protein (500aa)
THUMP domain protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JC56_9PORP
DNA methyltransferase {ECO:0000313|EMBL:KGN97778.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.
hypothetical protein
DolZOral124_scaffold_1596_20
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24469..26685
-----------------
DNA (2217bp)
protein (739aa)
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JC57_9PORP
Peptidase S9 {ECO:0000313|EMBL:KGN97779.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
prolyl tripeptidase A
DolZOral124_scaffold_1596_21
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26682..28061
-----------------
DNA (1380bp)
protein (460aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JC58_9PORP rbh
purD; phosphoribosylamine--glycine ligase
DolZOral124_scaffold_1596_22
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28158..29156
-----------------
DNA (999bp)
protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN97781.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
DolZOral124_scaffold_1596_23
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29162..31921
-----------------
DNA (2760bp)
protein (920aa)
DNA-directed DNA polymerase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9S9_9PORP rbh
DNA polymerase I {ECO:0000313|EMBL:KGN97782.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
DNA polymerase I
DolZOral124_scaffold_1596_24
unknown

Not on your lists

32011..32547
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

DolZOral124_scaffold_1596_25
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32630..33745
-----------------
DNA (1116bp)
protein (372aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN97742.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
DolZOral124_scaffold_1596_26
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33736..35274
-----------------
DNA (1539bp)
protein (513aa)
Mg chelatase-like protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JD26_9PORP rbh
Magnesium chelatase {ECO:0000313|EMBL:KGN97743.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
magnesium chelatase subunit D/I family protein
DolZOral124_scaffold_1596_16S_1
unknown

Not on your lists

35895..36921
-----------------
DNA (1027bp)
DolZOral124_scaffold_1596_trna_1
unknown

Not on your lists

37133..37206
-----------------
DNA (74bp)
transferRNA
Displaying 29 items

View Taxonomy