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DolZOral124_scaffold_1607

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1607_1
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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75..371
-----------------
DNA (297bp)
protein (99aa)
HU, DNA-binding transcriptional regulator, beta subunit n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PUZ2_CLOSD
hupB; HU, DNA-binding transcriptional regulator, beta subunit
DNA-binding protein {ECO:0000313|EMBL:KGG80635.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H532
DolZOral124_scaffold_1607_2
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

439..750
-----------------
DNA (312bp)
protein (104aa)
S4 domain-containing protein n=1 Tax=Clostridium intestinale URNW RepID=U2MZ42_9CLOT
S4 domain-containing protein {ECO:0000313|EMBL:ERK28512.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
DolZOral124_scaffold_1607_3
unknown

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701..1090
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

DolZOral124_scaffold_1607_4
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1242..2252
-----------------
DNA (1011bp)
protein (337aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=546269 species="Bac
Aspartate carbamoyltransferase n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQ16_FILAD
aspartate carbamoyltransferase
DolZOral124_scaffold_1607_5
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2262..3410
-----------------
DNA (1149bp)
protein (383aa)
Amidohydrolase family protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQ15_FILAD
dihydroorotase
Dihydroorotase (DHOase) {ECO:0000313|EMBL:EFE28868.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATC
DolZOral124_scaffold_1607_6
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3403..4254
-----------------
DNA (852bp)
protein (284aa)
pyrF; Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032220};; TaxID=499177 species="
Orotidine 5'-phosphate decarboxylase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PUS5_CLOSD
DolZOral124_scaffold_1607_7
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4301..4879
-----------------
DNA (579bp)
protein (193aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQ11_FILAD
orotate phosphoribosyltransferase
DolZOral124_scaffold_1607_8
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5069..6094
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MF49_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18718.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
DolZOral124_scaffold_1607_9
unknown

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6120..6572
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

DolZOral124_scaffold_1607_10
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6964..7920
-----------------
DNA (957bp)
protein (319aa)
Putative oligopeptide ABC transporter, permease protein AppB n=2 Tax=Turicibacter RepID=D4W4K2_9FIRM
Putative oligopeptide ABC transporter, permease protein AppB {ECO:0000313|EMBL:EFF64147.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turic
oppB; peptide ABC transporter permease
DolZOral124_scaffold_1607_11
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7922..9160
-----------------
DNA (1239bp)
protein (413aa)
ABC-type transport system permease protein (Probable substrate peptide/nickel) n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JKI4_HALH3
Peptide ABC transporter permease {ECO:0000313|EMBL:KGX86030.1}; TaxID=1385511 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 =
peptide/nickel ABC transporter permease
DolZOral124_scaffold_1607_12
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9172..10227
-----------------
DNA (1056bp)
protein (352aa)
Oligopeptide transport ATP-binding protein OppD n=6 Tax=Bacillus cereus RepID=J8ARR9_BACCE
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:EJR30302.1}; TaxID=1053226 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source=
peptide ABC transporter ATP-binding protein
DolZOral124_scaffold_1607_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10227..11189
-----------------
DNA (963bp)
protein (321aa)
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:CEO13849.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEO13849.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
ABC transporter family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VUR3_CLOBI
oppF; Oligopeptide transport ATP-binding protein OppF
DolZOral124_scaffold_1607_14
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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11349..12041
-----------------
DNA (693bp)
protein (231aa)
Conserved domain protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AEG7_CARHZ
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABB15277.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydoth
DolZOral124_scaffold_1607_15
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

12153..12956
-----------------
DNA (804bp)
protein (268aa)
lgt1; prolipoprotein diacylglyceryl transferase Lgt (EC:2.4.99.-)
lgt1; prolipoprotein diacylglyceryl transferase Lgt (EC:2.4.99.-) Tax=GWB2_Clostridiales_37_7_curated
Prolipoprotein diacylglyceryl transferase Lgt id=1779158 bin=GWB2_Clostridiales_37_7 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
DolZOral124_scaffold_1607_16
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12966..13805
-----------------
DNA (840bp)
protein (280aa)
Methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTP9_CLOSD
DolZOral124_scaffold_1607_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13808..14875
-----------------
DNA (1068bp)
protein (356aa)
Peptide chain release factor 1 n=219 Tax=Clostridium difficile RepID=RF1_CLOD6
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococc
DolZOral124_scaffold_1607_18
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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14879..15880
-----------------
DNA (1002bp)
protein (334aa)
Putative uncharacterized protein PH0435 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O73972_PYRHO
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1607_19
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15889..16323
-----------------
DNA (435bp)
protein (145aa)
ywlF; putative sugar phosphate isomerase YwlF (EC:5.3.1.-)
Putative sugar phosphate isomerase YwlF {ECO:0000313|EMBL:AHM55682.1}; EC=5.3.1.- {ECO:0000313|EMBL:AHM55682.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae
Ribose 5-phosphate isomerase B/allose 6-phosphate isomerase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTP5_CLOSD
DolZOral124_scaffold_1607_20
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16351..16980
-----------------
DNA (630bp)
protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {
Uracil phosphoribosyltransferase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=UPP_ALKMQ
upp; uracil phosphoribosyltransferase
DolZOral124_scaffold_1607_21
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17024..18079
-----------------
DNA (1056bp)
protein (352aa)
Glycosyl transferase, family 4 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TK53_ALKMQ
Glycosyl transferase {ECO:0000313|EMBL:KJF25772.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
glycosyl transferase family protein
DolZOral124_scaffold_1607_22
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18080..19204
-----------------
DNA (1125bp)
protein (375aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFG7_9CLOT
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDE98492.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source=
DolZOral124_scaffold_1607_23
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19334..19558
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJW7_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW20099.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
DolZOral124_scaffold_1607_24
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19562..19954
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003715660
ATP synthase subunit I {ECO:0000313|EMBL:KHS56476.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othini
ATP synthase protein I
DolZOral124_scaffold_1607_25
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19958..20641
-----------------
DNA (684bp)
protein (228aa)
ATP synthase subunit a n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TK58_ALKMQ
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
ATP synthase F0 subunit A
DolZOral124_scaffold_1607_26

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20644..21207
-----------------
DNA (564bp)
protein (188aa)
ATP synthase F0, C subunit id=88606 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ATP synthase F0 subunit C
DolZOral124_scaffold_1607_27

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21225..21491
-----------------
DNA (267bp)
protein (89aa)
F0F1 ATP synthase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] id=88605 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE25460.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
F0F1 ATP synthase subunit C
DolZOral124_scaffold_1607_28
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21542..22078
-----------------
DNA (537bp)
protein (179aa)
ATP synthase subunit b n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=ATPF_ALKOO
ATP synthase F0 subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
DolZOral124_scaffold_1607_29
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22066..22608
-----------------
DNA (543bp)
protein (181aa)
ATP synthase subunit delta n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IA55_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
ATP synthase F1 subunit delta
DolZOral124_scaffold_1607_30
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22627..24144
-----------------
DNA (1518bp)
protein (506aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=ATPA_ALKOO
Displaying items 1-30 of 43 in total

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