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DolZOral124_scaffold_1609

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1609_1
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..1135)
-----------------
DNA (1134bp)
protein (378aa)
F5/8 type C domain protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CMI1_9BACE
F5/8 type C domain protein {ECO:0000313|EMBL:ERI85745.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.
DolZOral124_scaffold_1609_2
Prevotella sp. oral taxon 317, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1305..2504)
-----------------
DNA (1200bp)
protein (400aa)
F5/8 type C domain protein n=1 Tax=Prevotella sp. oral taxon 317 str. F0108 RepID=D3IF98_9BACT
hypothetical protein
F5/8 type C domain protein {ECO:0000313|EMBL:EFC68694.1}; TaxID=575615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 317
DolZOral124_scaffold_1609_3
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2531..4462)
-----------------
DNA (1932bp)
protein (644aa)
SusD family protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DHY1_9BACE
SusD family protein {ECO:0000313|EMBL:ERI81087.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
RagB/SusD domain protein
DolZOral124_scaffold_1609_4
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4478..7738)
-----------------
DNA (3261bp)
protein (1087aa)
TonB-dependent receptor n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DN11_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:ERI81086.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
TonB-dependent receptor
DolZOral124_scaffold_1609_5
unknown

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8291..8701
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

DolZOral124_scaffold_1609_6
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8694..9266
-----------------
DNA (573bp)
protein (191aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IUE3_9PORP
ruvC; Holliday junction resolvase
DolZOral124_scaffold_1609_7
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9269..10456
-----------------
DNA (1188bp)
protein (396aa)
UPI0003D19F8D related cluster n=1 Tax=unknown RepID=UPI0003D19F8D
Capsule biosynthesis protein CapA {ECO:0000313|EMBL:KGN85012.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas g
putative capA protein
DolZOral124_scaffold_1609_8
Porphyromonas catoniae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10440..11264
-----------------
DNA (825bp)
protein (275aa)
Peptidase, M48 family {ECO:0000313|EMBL:EWC93467.1}; EC=3.4.24.- {ECO:0000313|EMBL:EWC93467.1};; TaxID=887901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyro
Peptidase, M48 family n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NDB2_9PORP
peptidase M48 family
DolZOral124_scaffold_1609_9
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11344..11724
-----------------
DNA (381bp)
protein (127aa)
endoribonuclease L-PSP n=1 Tax=Porphyromonas gulae RepID=UPI00037BBCFD
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGN85762.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
endoribonuclease L-PSP
DolZOral124_scaffold_1609_10
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11915..13132
-----------------
DNA (1218bp)
protein (406aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1515613 species="Bacteria; Bacter
Cysteine desulfurase, SufS family n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VLL5_9PORP
class V aminotransferase
DolZOral124_scaffold_1609_11
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13156..13734
-----------------
DNA (579bp)
protein (193aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
ribonuclease HII n=1 Tax=Porphyromonas gulae RepID=UPI000366AFAE
rnhB; ribonuclease HII
DolZOral124_scaffold_1609_12
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14162..15895
-----------------
DNA (1734bp)
protein (578aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2I6T5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN82243.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_1609_13
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15904..16389
-----------------
DNA (486bp)
protein (162aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GXZ8_9PORP
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:KGN86454.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromona
phosphotyrosine protein phosphatase
DolZOral124_scaffold_1609_14
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16441..17166
-----------------
DNA (726bp)
protein (242aa)
ComF family protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NGB6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN86486.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
phosphoribosyltransferase ComFC-like protein
DolZOral124_scaffold_1609_15
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17232..19094)
-----------------
DNA (1863bp)
protein (621aa)
30S ribosomal protein S1 n=1 Tax=Bacteroides pyogenes F0041 RepID=U2E155_9BACE
30S ribosomal protein S1 {ECO:0000313|EMBL:KGN82989.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-2
30S ribosomal protein S1
DolZOral124_scaffold_1609_16
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19382..21379)
-----------------
DNA (1998bp)
protein (666aa)
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:KGN82762.1}; EC=3.5.99.6 {ECO:0000313|EMBL:KGN82762.1};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadac
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00036B1391
glucosamine-6-phosphate deaminase-like protein
DolZOral124_scaffold_1609_17
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21643..22371)
-----------------
DNA (729bp)
protein (243aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porp
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VQF6_9PORP rbh
pyruvate formate-lyase activating enzyme
DolZOral124_scaffold_1609_18
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22381..24612)
-----------------
DNA (2232bp)
protein (744aa)
pflB; putative formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IZU2_9PORP rbh
Formate C-acetyltransferase {ECO:0000313|EMBL:ERJ73015.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. or
DolZOral124_scaffold_1609_19
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24929..26230)
-----------------
DNA (1302bp)
protein (434aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Porphyromonas gingivalis F0569 RepID=U2JIY5_PORGN rbh
DolZOral124_scaffold_1609_20
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26527..28146)
-----------------
DNA (1620bp)
protein (540aa)
ABC transporter, ATP-binding protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IX59_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGN83652.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromona
ABC transporter ATP-binding protein
DolZOral124_scaffold_1609_21
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(28219..30321)
-----------------
DNA (2103bp)
protein (701aa)
ATP-dependent DNA helicase RecG n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NJ42_9PORP rbh
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KGN83476.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp
ATP-dependent DNA helicase RecG
DolZOral124_scaffold_1609_22
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(30375..31313)
-----------------
DNA (939bp)
protein (313aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1515615 specie
Epoxyqueuosine reductase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VV99_9PORP
iron-sulfur cluster binding protein
DolZOral124_scaffold_1609_23
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(31320..32342)
-----------------
DNA (1023bp)
protein (341aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6H1M4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN85113.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
Sporulation related domain
DolZOral124_scaffold_1609_24
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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32803..34299
-----------------
DNA (1497bp)
protein (499aa)
glutamate--ammonia ligase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=GWF2_Bacteroidetes_35_48_curated
glnA3; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase id=2595727 bin=GWF2_Bacteroidetes_38_335 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
DolZOral124_scaffold_1609_trna_2
unknown

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comp(34915..34988)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1609_trna_1
unknown

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comp(35003..35076)
-----------------
DNA (74bp)
transferRNA
Displaying 26 items

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