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DolZOral124_scaffold_1626

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1626_1
unknown

Not on your lists

comp(113..691)
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

DolZOral124_scaffold_1626_2
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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993..1655
-----------------
DNA (663bp)
protein (221aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA-1; methionine-S-sulfoxide reductase (EC:1.8.4.-)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B606_9RHOB rbh
DolZOral124_scaffold_1626_3
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1683..2558)
-----------------
DNA (876bp)
protein (292aa)
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HHV9_RHOCA rbh
Ribokinase {ECO:0000313|EMBL:KDB02656.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
DolZOral124_scaffold_1626_4
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2593..4848)
-----------------
DNA (2256bp)
protein (752aa)
Malic enzyme {ECO:0000313|EMBL:KIC20554.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIC20554.1};; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leising
malic enzyme n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00031DFCEF rbh
malic enzyme
DolZOral124_scaffold_1626_5
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4982..7624
-----------------
DNA (2643bp)
protein (881aa)
DNA mismatch repair protein MutS n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FL63_9RHOB rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
mutS; DNA mismatch repair protein MutS
DolZOral124_scaffold_1626_6
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7747..8658
-----------------
DNA (912bp)
protein (304aa)
Acetylspermidine deacetylase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RHB6_9RHOB rbh
Acetoin utilization protein {ECO:0000313|EMBL:KDB02573.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimon
histone deacetylase superfamily protein
DolZOral124_scaffold_1626_7
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8896..9867)
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DZV5_9RHOB
Phosphotransferase enzyme family {ECO:0000313|EMBL:KGM88783.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovar
DolZOral124_scaffold_1626_8
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9973..10215
-----------------
DNA (243bp)
protein (81aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
xseB; exodeoxyribonuclease 7 small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Sagittula stellata E-37 RepID=A3K3P8_9RHOB
DolZOral124_scaffold_1626_9
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10222..11091
-----------------
DNA (870bp)
protein (290aa)
Geranyltranstransferase {ECO:0000313|EMBL:KHQ55184.1}; EC=2.5.1.10 {ECO:0000313|EMBL:KHQ55184.1};; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
ispA; geranyltranstransferase (EC:2.5.1.10)
Geranyltranstransferase IspA n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZFE9_ROSLO rbh
DolZOral124_scaffold_1626_10
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11125..13053
-----------------
DNA (1929bp)
protein (643aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7DUM7_PHAG2 rbh
DolZOral124_scaffold_1626_11
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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13148..14059
-----------------
DNA (912bp)
protein (304aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4K7_9RHOB rbh
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:EEW24090.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodo
lipid A biosynthesis acyltransferase
DolZOral124_scaffold_1626_12
Rhodobacteraceae bacterium HIMB11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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14072..15100
-----------------
DNA (1029bp)
protein (343aa)
Sialic acid synthase {ECO:0000313|EMBL:ERL98571.1}; EC=2.5.1.56 {ECO:0000313|EMBL:ERL98571.1};; TaxID=1366046 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.
neuB; sialic acid synthase (EC:2.5.1.56 2.5.1.57)
Sialic acid synthase n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V782_9RHOB rbh
DolZOral124_scaffold_1626_13
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15188..15826)
-----------------
DNA (639bp)
protein (213aa)
Glycosyltransferase n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PVQ1_PSEUV
Uncharacterized protein {ECO:0000313|EMBL:EYC52962.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
glycosyltransferase
DolZOral124_scaffold_1626_14
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15830..16597)
-----------------
DNA (768bp)
protein (256aa)
Uncharacterized protein n=4 Tax=Rhodobacter capsulatus RepID=D5APX1_RHOCB
hypothetical protein
Glycosyltransferase {ECO:0000313|EMBL:ETE52464.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatu
DolZOral124_scaffold_1626_15
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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16730..17851
-----------------
DNA (1122bp)
protein (374aa)
webC; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=4 Tax=Rhodobacter capsulatus RepID=D5APX2_RHOCB rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KFI32923.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haem
DolZOral124_scaffold_1626_16
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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17844..19100
-----------------
DNA (1257bp)
protein (419aa)
waaA2; 3-deoxy-D-manno-octulosonic-acid transferase WaaA (EC:2.4.-.-) rbh
Three-deoxy-D-manno-octulosonic-acid transferase-like protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EEC9_9RHOB rbh
3-deoxy-D-manno-octulosonic acid transferase {ECO:0000313|EMBL:KFI32924.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" sou
DolZOral124_scaffold_1626_17
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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19113..20441
-----------------
DNA (1329bp)
protein (443aa)
kdtA2; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.4.-.-)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EED0_9RHOB rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EBA13252.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" sourc
DolZOral124_scaffold_1626_18
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20428..21219)
-----------------
DNA (792bp)
protein (264aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=4 Tax=Rhodobacter capsulatus RepID=D5APX4_RHOCB rbh
short-chain dehydrogenase/reductase family oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:ETE52626.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsu
DolZOral124_scaffold_1626_19
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21212..21913)
-----------------
DNA (702bp)
protein (234aa)
cytidylyltransferase (EC:2.7.7.-) rbh
Cytidylyltransferase family protein n=4 Tax=Rhodobacter capsulatus RepID=D5APX5_RHOCB rbh
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:ETE52466.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhod
DolZOral124_scaffold_1626_20
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21910..22857)
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8H629_RHOCA rbh
oxidoreductase family NAD-binding Rossmann fold protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ETE52625.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsu
DolZOral124_scaffold_1626_21
unknown

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comp(23017..23259)
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

DolZOral124_scaffold_1626_22
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23340..24371)
-----------------
DNA (1032bp)
protein (344aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SI97_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP77078.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
DNA polymerase III subunit delta
DolZOral124_scaffold_1626_23
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24368..24871)
-----------------
DNA (504bp)
protein (168aa)
Lipoprotein, putative n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3S8Z4_9RHOB
Lipoprotein, putative {ECO:0000313|EMBL:EAP82276.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp.
lipoprotein
DolZOral124_scaffold_1626_24
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24858..27404)
-----------------
DNA (2547bp)
protein (849aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=999552 species="Bacteria; Proteob
UPI0003D6B386 related cluster n=1 Tax=unknown RepID=UPI0003D6B386 rbh
leucyl-tRNA synthetase
DolZOral124_scaffold_1626_25
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27518..28090)
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B416E8
Uncharacterized protein {ECO:0000313|EMBL:KEJ91091.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter d
hypothetical protein
DolZOral124_scaffold_1626_26
unknown

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28162..28272
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

DolZOral124_scaffold_1626_27
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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28342..29610
-----------------
DNA (1269bp)
protein (423aa)
Threonine synthase {ECO:0000313|EMBL:EDM70431.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EDM70431.1};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ros
Threonine synthase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FU52_9RHOB rbh
glycosyltransferase
DolZOral124_scaffold_1626_28
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29743..30270)
-----------------
DNA (528bp)
protein (176aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TW77_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ03873.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
hypothetical protein
DolZOral124_scaffold_1626_29
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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30600..31571
-----------------
DNA (972bp)
protein (324aa)
Outer membrane porin n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DWM5_9RHOB
Porin {ECO:0000313|EMBL:KEJ97283.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
outer membrane porin
DolZOral124_scaffold_1626_30
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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31685..32332
-----------------
DNA (648bp)
protein (216aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FU50_9RHOB rbh
Pyridoxal phosphate biosynthesis protein {ECO:0000313|EMBL:KEJ97284.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source
hypothetical protein rbh
Displaying items 1-30 of 34 in total

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