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DolZOral124_scaffold_1688

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1688_1
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1068
-----------------
DNA (1068bp)
protein (356aa)
DNA repair protein RecN n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S1Q4_BUTPB
recN; DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae
DolZOral124_scaffold_1688_2
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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1073..2809
-----------------
DNA (1737bp)
protein (579aa)
Fibronectin-binding protein A domain protein n=3 Tax=Lachnospiraceae RepID=C9L6B2_BLAHA
Predicted RNA-binding protein homologous to eukaryotic snRNP
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1688_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2922..4178
-----------------
DNA (1257bp)
protein (419aa)
Membrane protein, putative n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWI1_9CLOT
Membrane protein, putative {ECO:0000313|EMBL:EOD00974.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritim
major facilitator superfamily permease
DolZOral124_scaffold_1688_4
unknown

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4368..4490
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

DolZOral124_scaffold_1688_5
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4512..5192
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NRV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04889.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
RNA binding S1 domain-containing protein
DolZOral124_scaffold_1688_6
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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5234..6661
-----------------
DNA (1428bp)
protein (476aa)
Tex-like protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TDZ4_9CLOT
transcriptional accessory protein
Tax=BJP_IG2069_Clostridiales_48_15
DolZOral124_scaffold_1688_7
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6661..7740
-----------------
DNA (1080bp)
protein (360aa)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Eubacterium RepID=C4Z0Y2_EUBE2
aspartate-semialdehyde dehydrogenase
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ACR72245.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (s
DolZOral124_scaffold_1688_8
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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7749..8612
-----------------
DNA (864bp)
protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C3A6_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1688_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8700..9794
-----------------
DNA (1095bp)
protein (365aa)
Ribosome-binding ATPase YchF n=2 Tax=Clostridium RepID=B6FU38_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 178
putative GTPase
DolZOral124_scaffold_1688_10
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9850..10731
-----------------
DNA (882bp)
protein (294aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:505 RepID=R7ASC4_9CLOT
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1688_11
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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10843..12522
-----------------
DNA (1680bp)
protein (560aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9X9S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL20171.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
GGDEF domain-containing protein
DolZOral124_scaffold_1688_12
Clostridium sp. CAG:1000, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12756..13184
-----------------
DNA (429bp)
protein (143aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:1000 RepID=R4ZZW5_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262768 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; en
cell division protein MraZ
DolZOral124_scaffold_1688_13
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13196..14137
-----------------
DNA (942bp)
protein (314aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AT90_9FIRM rbh
DolZOral124_scaffold_1688_14
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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14140..14646
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E8I2_9FIRM
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1688_15
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14648..16480
-----------------
DNA (1833bp)
protein (611aa)
Penicillin-binding protein, transpeptidase domain protein n=2 Tax=Clostridiales RepID=B0NCD4_CLOSV
Cell division protein FtsI/penicillin-binding protein 2
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1688_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16514..17479
-----------------
DNA (966bp)
protein (322aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DFV1_9FIRM
murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1688_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

17483..18823
-----------------
DNA (1341bp)
protein (447aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263021 species="Bacteria; Firmicutes; environmental sam
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MK06_9FIRM
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
DolZOral124_scaffold_1688_18
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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18804..19751
-----------------
DNA (948bp)
protein (316aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y2Y4_9FIRM
phospho-N-acetylmuramoyl-pentapeptide-transferase
DolZOral124_scaffold_1688_19
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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19778..20920
-----------------
DNA (1143bp)
protein (381aa)
Putative cell division protein FtsW n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXD7_9CLOT
cell division membrane protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1688_20
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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20913..21731
-----------------
DNA (819bp)
protein (273aa)
Cell division septal protein n=2 Tax=Clostridiales RepID=D4MZF7_9FIRM
Cell division septal protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1688_21
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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21980..23257
-----------------
DNA (1278bp)
protein (426aa)
cell division protein FtsZ n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B3663C
ftsZ; cell division protein FtsZ
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1688_22
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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23263..23718
-----------------
DNA (456bp)
protein (152aa)
Transcriptional repressor NrdR n=2 Tax=Clostridiales RepID=R5TE11_9FIRM
transcriptional regulator NrdR
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1688_23
unknown

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23748..24134
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

DolZOral124_scaffold_1688_24
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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24109..25218
-----------------
DNA (1110bp)
protein (370aa)
ABC transporter, ATP-binding protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLN5_9FIRM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP23248.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra ATCC
ABC transporter ATP-binding permease
DolZOral124_scaffold_1688_25
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25360..26610
-----------------
DNA (1251bp)
protein (417aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium sp. CAG:411 RepID=R7I515_9CLOT
DolZOral124_scaffold_1688_26
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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26615..28414
-----------------
DNA (1800bp)
protein (600aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6R0X0_9FIRM rbh
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1688_27
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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28414..28830
-----------------
DNA (417bp)
protein (139aa)
Positive regulator of sigma E, RseC/MucC n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LVJ3_TEPAE
Positive regulator of sigma E, RseC/MucC
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1688_28
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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28969..30204
-----------------
DNA (1236bp)
protein (412aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=8 Tax=Thermoanaerobacter RepID=GLYA_THEP3 rbh
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1688_29
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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30204..31493
-----------------
DNA (1290bp)
protein (430aa)
CapA domain protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7C2_NATTJ
CapA domain-containing protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1688_30
unknown

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31522..33291
-----------------
DNA (1770bp)
protein (590aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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