ggKbase home page

DolZOral124_scaffold_1690

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1690_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..201)
-----------------
DNA (201bp)
protein (67aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2F0_DESSD
DolZOral124_scaffold_1690_2
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(194..2683)
-----------------
DNA (2490bp)
protein (830aa)
DNA gyrase, subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=GWB2_Desulfobacterales_56_26_curated
DNA gyrase subunit A id=1726916 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DNA gyrase, subunit A
DolZOral124_scaffold_1690_3
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2701..5118)
-----------------
DNA (2418bp)
protein (806aa)
DNA gyrase subunit B (EC:5.99.1.3) Tax=GWB2_Desulfobacterales_56_26_curated
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=1726915 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_1690_4
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5151..6281)
-----------------
DNA (1131bp)
protein (377aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=177439 species="Bacter
DNA polymerase III subunit beta n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQJ6_DESPS
DNA polymerase III, beta chain
DolZOral124_scaffold_1690_5
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6499..7581
-----------------
DNA (1083bp)
protein (361aa)
Putative uncharacterized protein id=1726913 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
penicillin-binding protein, beta-lactamase class C
DolZOral124_scaffold_1690_6
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7605..7778)
-----------------
DNA (174bp)
protein (58aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2E5_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF77658.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa s
DolZOral124_scaffold_1690_7
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7791..8069)
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS00095.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
Putative uncharacterized protein id=1726911 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_1690_8
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8105..8479)
-----------------
DNA (375bp)
protein (125aa)
Putative uncharacterized protein id=1726910 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
putative peroxiredoxin Tax=GWB2_Desulfobacterales_56_26_curated
putative peroxiredoxin
DolZOral124_scaffold_1690_9

Not on your lists

comp(8502..8756)
-----------------
DNA (255bp)
protein (85aa)
Preprotein translocase subunit TatC n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IK55_9DELT
Marine sediment metagenome DNA, contig: S01H4_S03864 {ECO:0000313|EMBL:GAG80550.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative redox protein, regulator of disulfide bond formation
DolZOral124_scaffold_1690_10
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8990..10345
-----------------
DNA (1356bp)
protein (452aa)
Putative uncharacterized protein id=1726908 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
YeeE/YedE family protein (DUF395) Tax=GWB2_Desulfobacterales_56_26_curated
YeeE/YedE family protein (DUF395)
DolZOral124_scaffold_1690_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10440..10724
-----------------
DNA (285bp)
protein (95aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=GWB2_Desulfobacterales_56_26_
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=1726904 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_1690_12
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10756..12213
-----------------
DNA (1458bp)
protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=162971
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=1726903 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_1690_13

Not on your lists

12239..13348
-----------------
DNA (1110bp)
protein (370aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
Histidinol-phosphate aminotransferase n=1 Tax=uncultured bacterium RepID=K1Z6X4_9BACT
histidinol-phosphate aminotransferase
DolZOral124_scaffold_1690_14
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13345..14028
-----------------
DNA (684bp)
protein (228aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=GWB2_Desulfobacterales_56_26_curated
Cytidylate kinase id=1726901 bin=GWB2_Desulfobacterales_56_26 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
cytidylate kinase
DolZOral124_scaffold_1690_15

Not on your lists

comp(14076..14714)
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YBM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD40195.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
DolZOral124_scaffold_1690_16
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14893..17028
-----------------
DNA (2136bp)
protein (712aa)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=uncultured bacterium RepID=K1YSU4_9BACT
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobactera
rlmL; 23S rRNA m(2)G2445 methyltransferase
DolZOral124_scaffold_1690_17
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17055..18089
-----------------
DNA (1035bp)
protein (345aa)
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:KJS00105.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BR
Probable 3-oxoacyl-[acyl-carrier-protein] synthase III id=1726894 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
3-oxoacyl-(acyl-carrier-protein) synthase III
DolZOral124_scaffold_1690_18
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18086..18706
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P771_DESSD
Uncharacterized protein {ECO:0000313|EMBL:KJS00107.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
hypothetical protein
DolZOral124_scaffold_1690_19
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18735..19196
-----------------
DNA (462bp)
protein (154aa)
Thioesterase {ECO:0000313|EMBL:KJS00109.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
phenylacetic acid degradation-related protein id=1726888 bin=GWB2_Desulfobacterales_56_26 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
uncharacterized protein, possibly involved in aromatic compounds catabolism
DolZOral124_scaffold_1690_20
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19357..20652)
-----------------
DNA (1296bp)
protein (432aa)
DNA/RNA helicase, superfamily II n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5J6_DESSD
DNA/RNA helicase, superfamily II
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AGF76947.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desul
DolZOral124_scaffold_1690_21
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20868..21800)
-----------------
DNA (933bp)
protein (311aa)
Uncharacterized protein n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AER0_GEOSK
Uncharacterized protein {ECO:0000313|EMBL:KIE43441.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
hypothetical protein
DolZOral124_scaffold_1690_22
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21864..22964)
-----------------
DNA (1101bp)
protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BXU3_DESAD
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="D
DolZOral124_scaffold_1690_23
unknown

Not on your lists

23049..23207
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

DolZOral124_scaffold_1690_24
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23288..24577)
-----------------
DNA (1290bp)
protein (430aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
Phosphomethylpyrimidine synthase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REK1_DESPD
hydroxymethylpyrimidine synthase
DolZOral124_scaffold_1690_25

Not on your lists

comp(24644..25273)
-----------------
DNA (630bp)
protein (210aa)
Thiamine-phosphate synthase {ECO:0000256|RuleBase:RU003826}; EC=2.5.1.3 {ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|RuleBase:RU003826}; Flags: Fragment;; TaxID=
Thiamine-phosphate synthase (Fragment) n=1 Tax=uncultured bacterium RepID=K1Y5S5_9BACT
thiamine-phosphate diphosphorylase
DolZOral124_scaffold_1690_26
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25270..25800)
-----------------
DNA (531bp)
protein (177aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REJ9_DESPD
UBA/THIF-type NAD/FAD-binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ADW18075.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="
DolZOral124_scaffold_1690_27
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25797..26915)
-----------------
DNA (1119bp)
protein (373aa)
thiamine biosynthesis protein ThiH n=1 Tax=Desulfobacter curvatus RepID=UPI000374BEC2
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:KJS31040.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source=
tyrosine lyase ThiH
DolZOral124_scaffold_1690_28
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26925..27698)
-----------------
DNA (774bp)
protein (258aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulb
thiazole synthase n=1 Tax=Desulfobacter curvatus RepID=UPI0003691423
thiazole-phosphate synthase
DolZOral124_scaffold_1690_29
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27700..27897)
-----------------
DNA (198bp)
protein (66aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G318_9DELT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EMS78136.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="
thiS; thiazole biosynthesis protein ThiS
DolZOral124_scaffold_1690_30
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28178..28645)
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W5I1_HAEP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW15625.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfl
Displaying items 1-30 of 32 in total

View Taxonomy