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DolZOral124_scaffold_1710

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1710_1
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..208
-----------------
DNA (207bp)
protein (69aa)
30S ribosomal protein S18 n=1 Tax=Clostridium sp. CAG:632 RepID=R5JXH5_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clost
SSU ribosomal protein S18P
DolZOral124_scaffold_1710_2
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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456..776
-----------------
DNA (321bp)
protein (107aa)
Thioredoxin n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNU7_CELLD
thioredoxin
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1710_3
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(866..1438)
-----------------
DNA (573bp)
protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO
xpt; xanthine phosphoribosyltransferase Xpt (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAD0_9FIRM
DolZOral124_scaffold_1710_4
Vibrionales bacterium SWAT-3, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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1700..3949
-----------------
DNA (2250bp)
protein (750aa)
Transmembrane protein, putative n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KV37_9GAMM
Transmembrane protein, putative {ECO:0000313|EMBL:EDK30711.1}; TaxID=391574 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; unclassified Vibrionales.;" source="Vibrionales bacteri
lipoprotein
DolZOral124_scaffold_1710_5
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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4168..6339
-----------------
DNA (2172bp)
protein (724aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9WZM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15909.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
methyl-accepting chemotaxis sensory transducer
DolZOral124_scaffold_1710_6
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6570..7577
-----------------
DNA (1008bp)
protein (336aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=7 Tax=Clostridium thermocellum RepID=A3DBI1_CLOTH
DolZOral124_scaffold_1710_7
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7684..8325
-----------------
DNA (642bp)
protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
nth; putative endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium intestinale URNW RepID=U2NKF9_9CLOT
DolZOral124_scaffold_1710_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8325..8960
-----------------
DNA (636bp)
protein (212aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
Uridine kinase n=2 Tax=Clostridium botulinum E RepID=B2V373_CLOBA
DolZOral124_scaffold_1710_9
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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8979..11102
-----------------
DNA (2124bp)
protein (708aa)
Putative neopullulanase 1 n=1 Tax=Clostridium sp. CAG:230 RepID=R6DU17_9CLOT
glycoside hydrolase family 13 protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1710_10
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11092..11520
-----------------
DNA (429bp)
protein (143aa)
VanZ family protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DR49_9FIRM
VanZ family protein {ECO:0000313|EMBL:CCX82750.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp.
glycopeptide antibiotics resistance protein
DolZOral124_scaffold_1710_11
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11524..12531
-----------------
DNA (1008bp)
protein (336aa)
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B238_CLOA9
DolZOral124_scaffold_1710_12
Lysinibacillus odysseyi, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12556..13782
-----------------
DNA (1227bp)
protein (409aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FWE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGR88055.1}; TaxID=1220589 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus odysseyi 34hs-1 = NBRC 10
hypothetical protein
DolZOral124_scaffold_1710_13
unknown

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13888..14532
-----------------
DNA (645bp)
protein (215aa)

This feature has no annotations

DolZOral124_scaffold_1710_14
unknown

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14693..15187
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein n=1 Tax=Streptococcus marimammalium RepID=UPI00036418CA
DolZOral124_scaffold_1710_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15258..16517)
-----------------
DNA (1260bp)
protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; e
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4E8_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
DolZOral124_scaffold_1710_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16510..17196)
-----------------
DNA (687bp)
protein (229aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP47_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDB27223.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiale
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
DolZOral124_scaffold_1710_17
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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17412..22067
-----------------
DNA (4656bp)
protein (1552aa)
Fibronectin type III domain protein id=1820424 bin=GWD2_Clostridiales_32_59 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
fibronectin type III
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1710_18
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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22072..26253
-----------------
DNA (4182bp)
protein (1394aa)
Fibronectin type III domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JT78_CELLD rbh
fibronectin type III
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1710_19
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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26413..27303
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI00030430A4
Integral membrane protein {ECO:0000313|EMBL:CEG28621.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
EamA-like transporter family protein
DolZOral124_scaffold_1710_20
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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27443..28318
-----------------
DNA (876bp)
protein (292aa)
Putative fructokinase n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2SU53_9FUSO
Putative fructokinase {ECO:0000313|EMBL:ERK68858.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W977
ROK family protein
DolZOral124_scaffold_1710_21
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28308..29198
-----------------
DNA (891bp)
protein (297aa)
Copper amine oxidase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VL58_CLOSH
copper amine oxidase domain protein
Copper amine oxidase domain protein {ECO:0000313|EMBL:AGC67201.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium ste
DolZOral124_scaffold_1710_22
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29214..31481
-----------------
DNA (2268bp)
protein (756aa)
MorA n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BBF2_CLOBO
Nitrogen fixation protein {ECO:0000313|EMBL:KGM96573.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
DolZOral124_scaffold_1710_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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31513..32589
-----------------
DNA (1077bp)
protein (359aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospirac
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9J5_9FIRM
DolZOral124_scaffold_1710_24
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32705..33265
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WM64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03985.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
bioY; biotin synthase
DolZOral124_scaffold_1710_25
Leptotrichia hofstadii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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34266..35018
-----------------
DNA (753bp)
protein (251aa)
methyltransferase n=1 Tax=Leptotrichia shahii RepID=UPI00036044CB
Methyltransferase domain protein {ECO:0000313|EMBL:EEX75846.1}; TaxID=634994 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia hofstadii F0254.;"
type 11 methyltransferase
DolZOral124_scaffold_1710_26
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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35030..35965
-----------------
DNA (936bp)
protein (312aa)
1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5ECD8_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
Displaying 26 items

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