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DolZOral124_scaffold_1738

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1738_1
unknown

Not on your lists

comp(3..707)
-----------------
DNA (705bp)
protein (235aa)

This feature has no annotations

DolZOral124_scaffold_1738_2
Psychrobacter sp. JCM 18901, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(721..1833)
-----------------
DNA (1113bp)
protein (371aa)
Uncharacterized protein {ECO:0000313|EMBL:GAF55368.1}; TaxID=1298609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
DolZOral124_scaffold_1738_3
unknown

Not on your lists

comp(1870..2937)
-----------------
DNA (1068bp)
protein (356aa)

This feature has no annotations

DolZOral124_scaffold_1738_4
unknown

Not on your lists

comp(3042..4133)
-----------------
DNA (1092bp)
protein (364aa)

This feature has no annotations

DolZOral124_scaffold_1738_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4177..4953)
-----------------
DNA (777bp)
protein (259aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CHP9_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI67550.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
DolZOral124_scaffold_1738_6
unknown

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comp(4996..5541)
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

DolZOral124_scaffold_1738_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(5561..7024)
-----------------
DNA (1464bp)
protein (488aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF10_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68339.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DolZOral124_scaffold_1738_8
Capnocytophaga sp. oral taxon 326, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7043..8176)
-----------------
DNA (1134bp)
protein (378aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PM18_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKY16794.1}; TaxID=1035193 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp.
hypothetical protein
DolZOral124_scaffold_1738_9
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8286..8963)
-----------------
DNA (678bp)
protein (226aa)
Bacterial group 2 Ig-like protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UPM0_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETK06271.1}; TaxID=1411022 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon B
DolZOral124_scaffold_1738_10
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9179..10306)
-----------------
DNA (1128bp)
protein (376aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00037DEBF7
small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AJQ96269.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynue
DolZOral124_scaffold_1738_11
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10359..11813)
-----------------
DNA (1455bp)
protein (485aa)
Putative glycine rich membrane protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EIC0_9GAMM
hypothetical protein; K06872 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
hypothetical protein
DolZOral124_scaffold_1738_12
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11813..13255)
-----------------
DNA (1443bp)
protein (481aa)
Putative glycine rich membrane protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EIC0_9GAMM
hypothetical protein; K06872 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
hypothetical protein
DolZOral124_scaffold_1738_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13388..14890)
-----------------
DNA (1503bp)
protein (501aa)
Mll4127 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EQ9_RHILO
hypothetical protein
Mll4127 protein {ECO:0000313|EMBL:BAB50858.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
DolZOral124_scaffold_1738_14
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15160..15762)
-----------------
DNA (603bp)
protein (201aa)
LemA family protein n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V2S1_ARCNC
LemA family protein
LemA family protein {ECO:0000313|EMBL:ADG92503.1}; Flags: Precursor;; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source
DolZOral124_scaffold_1738_15
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15962..17440)
-----------------
DNA (1479bp)
protein (493aa)
Gamma-glutamyl-aminobutyraldehyde dehydrogenase n=1 Tax=Serratia fonticola AU-P3(3) RepID=U2MJW5_SERFO
Aldehyde dehydrogenase {ECO:0000313|EMBL:AKG71150.1}; TaxID=47917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fonticola.
aldehyde dehydrogenase
DolZOral124_scaffold_1738_16
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17543..18109)
-----------------
DNA (567bp)
protein (189aa)
DNA-binding transcriptional repressor PuuR n=1 Tax=Serratia plymuthica PRI-2C RepID=I3AMV6_SERPL
DNA-binding transcriptional repressor PuuR {ECO:0000313|EMBL:EIJ20449.1}; TaxID=1154756 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" sourc
XRE family transcriptional regulator
DolZOral124_scaffold_1738_17
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18137..18883)
-----------------
DNA (747bp)
protein (249aa)
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI000375186B
Gamma-glutamyl-GABA hydrolase {ECO:0000313|EMBL:GAF60335.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
glutamine amidotransferase
DolZOral124_scaffold_1738_18
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19063..20391
-----------------
DNA (1329bp)
protein (443aa)
glutamine synthetase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI0002898148
glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:AGP48453.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. G.;"
DolZOral124_scaffold_1738_19
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20394..21713
-----------------
DNA (1320bp)
protein (440aa)
gamma-glutamylputrescine oxidoreductase n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003634D77 rbh
gamma-glutamylputrescine oxidoreductase
Gamma-glutamylputrescine oxidoreductase {ECO:0000313|EMBL:AGP48452.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psy
DolZOral124_scaffold_1738_20
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21884..23374
-----------------
DNA (1491bp)
protein (497aa)
sodium:proton antiporter n=1 Tax=Psychrobacter lutiphocae RepID=UPI000370503D
sodium:proton antiporter
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:GAF58620.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. J
DolZOral124_scaffold_1738_21
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23585..25078
-----------------
DNA (1494bp)
protein (498aa)
sodium:proton antiporter n=1 Tax=Psychrobacter lutiphocae RepID=UPI000370503D
sodium:proton antiporter
Sodium:proton antiporter {ECO:0000313|EMBL:AGP48451.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
DolZOral124_scaffold_1738_22
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25147..26013
-----------------
DNA (867bp)
protein (289aa)
N-carbamoylputrescine amidase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000288A0A2 rbh
N-carbamoylputrescine amidase {ECO:0000313|EMBL:GAF58619.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
N-carbamoylputrescine amidase
DolZOral124_scaffold_1738_23
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26068..27162
-----------------
DNA (1095bp)
protein (365aa)
Agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841, ECO:0000256|SAAS:SAAS00035117}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841, ECO:0000256|SAAS:SAAS00035117};; Agmatine iminohydrolase {ECO:0000256
agmatine deiminase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289A631
agmatine deiminase
DolZOral124_scaffold_1738_24
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(27483..28223)
-----------------
DNA (741bp)
protein (247aa)
50S ribosomal protein L17 n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VHG5_9SPHI
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sp
rplQ; 50S ribosomal protein L17
DolZOral124_scaffold_1738_25
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28265..29227)
-----------------
DNA (963bp)
protein (321aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6I5_9GAMM
DolZOral124_scaffold_1738_26
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29264..29884)
-----------------
DNA (621bp)
protein (207aa)
30S ribosomal protein S4 n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=RS4_DICNV
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dichelo
DolZOral124_scaffold_1738_27
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29903..30289)
-----------------
DNA (387bp)
protein (129aa)
30S ribosomal protein S11 n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZCQ7_9GAMM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Card
30S ribosomal protein S11
DolZOral124_scaffold_1738_28
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30311..30667)
-----------------
DNA (357bp)
protein (119aa)
30S ribosomal protein S13 n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DY04_9GAMM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methylo
30S ribosomal protein S13
DolZOral124_scaffold_1738_29
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30789..30905)
-----------------
DNA (117bp)
protein (39aa)
50S ribosomal protein L36 n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JX44_MARM1
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" sourc
DolZOral124_scaffold_1738_30
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30926..32269)
-----------------
DNA (1344bp)
protein (448aa)
Protein translocase subunit SecY n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZCQ9_9GAMM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" sourc
secY; preprotein translocase subunit SecY
Displaying items 1-30 of 41 in total

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