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DolZOral124_scaffold_4752

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_4752_1
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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834..1205
-----------------
DNA (372bp)
protein (124aa)
Response regulator receiver domain protein id=2102539 bin=GWB2_Desulfobacterales_56_26 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
response regulator receiver protein Tax=GWB2_Desulfobacterales_56_26_curated
Response regulator, CheY-like receiver
DolZOral124_scaffold_4752_2
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1636..3336
-----------------
DNA (1701bp)
protein (567aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZJY0_9BACT rbh
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KJS02368.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae b
long-chain-fatty-acid--CoA ligase
DolZOral124_scaffold_4752_3
Vibrio sp. AND4, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3399..4007)
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein n=1 Tax=Vibrio sp. AND4 RepID=A8T8C8_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EDP58344.1}; TaxID=314289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. AND4.;"
hypothetical protein
DolZOral124_scaffold_4752_4
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4057..4818)
-----------------
DNA (762bp)
protein (254aa)
Probable amino acid ABC transporter, ATP-binding protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANA8_DESPS
amino acid ABC transporter ATP-binding protein
Probable amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAG36166.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulf
DolZOral124_scaffold_4752_5
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4852..6279)
-----------------
DNA (1428bp)
protein (476aa)
Probable amino acid ABC transporter, permease protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANA9_DESPS rbh
amino acid ABC transporter permease rbh
Probable amino acid ABC transporter, permease protein {ECO:0000313|EMBL:CAG36165.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfota
DolZOral124_scaffold_4752_6
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6296..7492)
-----------------
DNA (1197bp)
protein (399aa)
Probable amino acid ABC transporter, permease protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANB0_DESPS rbh
amino acid ABC transporter permease
Probable amino acid ABC transporter, permease protein {ECO:0000313|EMBL:CAG36164.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfota
DolZOral124_scaffold_4752_7
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7631..8650)
-----------------
DNA (1020bp)
protein (340aa)
Probable amino acid ABC transporter, periplasmic substrate-binding protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANB1_DESPS rbh
amino acid ABC transporter periplasmic substrate-binding protein
Probable amino acid ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CAG36163.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulf
DolZOral124_scaffold_4752_8
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9216..10106
-----------------
DNA (891bp)
protein (297aa)
Hypothetical membrane protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANB2_DESPS rbh
hypothetical protein rbh
Hypothetical membrane protein {ECO:0000313|EMBL:CAG36162.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfota
DolZOral124_scaffold_4752_9
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10184..11308
-----------------
DNA (1125bp)
protein (375aa)
Related to cold-adapted alanine dehydrogenase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANB3_DESPS
cold-adapted alanine dehydrogenase
Related to cold-adapted alanine dehydrogenase {ECO:0000313|EMBL:CAG36161.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" s
DolZOral124_scaffold_4752_10
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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11481..11942
-----------------
DNA (462bp)
protein (154aa)
Glyoxalase family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEW8_9BACT
Glyoxalase family protein {ECO:0000313|EMBL:EDY83472.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
glyoxalase/bleomycin resistance protein/dioxygenase
DolZOral124_scaffold_4752_11
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12401..12820)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DQ09_DESVM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL08873.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio
DolZOral124_scaffold_4752_12
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12853..14694)
-----------------
DNA (1842bp)
protein (614aa)
TRAP transporter, DctM subunit n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YHS2_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EGW50268.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
TRAP dicarboxylate transporter subunit DctM
DolZOral124_scaffold_4752_13
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15274..16290)
-----------------
DNA (1017bp)
protein (339aa)
C4-dicarboxylate ABC transporter n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A5B482 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGW50267.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
TRAP dicarboxylate transporter subunit DctP
DolZOral124_scaffold_4752_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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17178..18476
-----------------
DNA (1299bp)
protein (433aa)
PAS/PAC sensor-containing diguanylate cyclase Tax=RBG_16_Euryarchaeota_41_19_curated
PAS domain S-box id=2705160 bin=GWC1_Spirochaetes_27_15 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
putative signal transduction histidine kinase
DolZOral124_scaffold_4752_15
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18915..19484
-----------------
DNA (570bp)
protein (190aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRL9_SYNAS
response regulator
Tax=BJP_IG2069_Syntrophobacterales_47_18
DolZOral124_scaffold_4752_16
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19862..20908
-----------------
DNA (1047bp)
protein (349aa)
Betaine-homocysteine S-methyltransferase {ECO:0000313|EMBL:GAB54324.1}; EC=2.1.1.5 {ECO:0000313|EMBL:GAB54324.1};; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales
Betaine-homocysteine S-methyltransferase n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5T7P7_9ALTE
homocysteine S-methyltransferase
DolZOral124_scaffold_4752_17
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21017..21709
-----------------
DNA (693bp)
protein (231aa)
HAD superfamily hydrolase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A4S3_PELCD
HAD superfamily hydrolase
HAD superfamily hydrolase {ECO:0000313|EMBL:ABA88634.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carb
DolZOral124_scaffold_4752_18
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21847..22410)
-----------------
DNA (564bp)
protein (188aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4ELI6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA11455.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CC
hypothetical protein
DolZOral124_scaffold_4752_19
Streptococcus sobrinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22669..22986
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein n=2 Tax=Streptococcus sobrinus RepID=M7DWN4_9STRE
Putative HTH-type transcriptional activator HxlR {ECO:0000313|EMBL:ERJ76724.1}; TaxID=1227275 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Strept
hypothetical protein
DolZOral124_scaffold_4752_20
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23366..24418)
-----------------
DNA (1053bp)
protein (351aa)
2-oxoglutarate synthase (EC:1.2.7.3)
2-oxoglutarate synthase {ECO:0000313|EMBL:ADW16250.1}; EC=1.2.7.3 {ECO:0000313|EMBL:ADW16250.1};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbace
2-oxoglutarate synthase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHC4_DESPD
DolZOral124_scaffold_4752_21
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24415..26262)
-----------------
DNA (1848bp)
protein (616aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHC3_DESPD
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ADW16249.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; De
DolZOral124_scaffold_4752_22
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26259..28031)
-----------------
DNA (1773bp)
protein (591aa)
Glutamate synthase (NADPH) {ECO:0000313|EMBL:AEE51522.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AEE51522.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiracea
Glutamate synthase (NADPH) n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZV2_HALH1
glutamate synthase
DolZOral124_scaffold_4752_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28247..28612)
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:AAZ45250.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="De
DolZOral124_scaffold_4752_24
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29118..30089
-----------------
DNA (972bp)
protein (324aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B52BD1 rbh
bcsP31; 31 kDa immunogenic protein
31 kDa immunogenic protein {ECO:0000313|EMBL:AFP31025.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter s
DolZOral124_scaffold_4752_25
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30090..30563
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3BDAB
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
DolZOral124_scaffold_4752_26
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30616..32877
-----------------
DNA (2262bp)
protein (754aa)
transporter n=1 Tax=Desulfospira joergensenii RepID=UPI0003B73F90
Transporter {ECO:0000313|EMBL:EAQ24039.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
transporter
DolZOral124_scaffold_4752_27
unknown

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comp(32958..33743)
-----------------
DNA (786bp)
protein (262aa)

This feature has no annotations

DolZOral124_scaffold_4752_28

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33906..34805
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLL0_9BACT
Marine sediment metagenome DNA, contig: S01H1_L00814 {ECO:0000313|EMBL:GAF70503.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Displaying 28 items

View Taxonomy