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DolZOral124_scaffold_3200

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_3200_1
unknown

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comp(228..377)
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

DolZOral124_scaffold_3200_2
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(513..1775)
-----------------
DNA (1263bp)
protein (421aa)
LL-diaminopimelate aminotransferase n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2J2_DESRD
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-amin
L,L-diaminopimelate aminotransferase
DolZOral124_scaffold_3200_3
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1882..4488
-----------------
DNA (2607bp)
protein (869aa)
Aminopeptidase N {ECO:0000313|EMBL:KJR98113.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a
Probable aminopeptidase N id=2210897 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
pepN; aminopeptidase N
DolZOral124_scaffold_3200_4
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4540..6015)
-----------------
DNA (1476bp)
protein (492aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16) Tax=GWB2_Desulfobacterales_56_26_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1Y4E6_9BACT
DolZOral124_scaffold_3200_5

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6124..7734
-----------------
DNA (1611bp)
protein (537aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y8X2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD39330.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
muropeptide permease AmpG
DolZOral124_scaffold_3200_6

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comp(7763..8323)
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQ91_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD39331.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type IV pilus assembly PilZ
DolZOral124_scaffold_3200_7

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comp(8341..9906)
-----------------
DNA (1566bp)
protein (522aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQ99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD39332.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Fis family sigma-54 specific transcriptional regulator
DolZOral124_scaffold_3200_8
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10223..11362
-----------------
DNA (1140bp)
protein (380aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHT5_DESPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW18429.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DolZOral124_scaffold_3200_9
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11381..14959)
-----------------
DNA (3579bp)
protein (1193aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AMQ8_DESPS
Uncharacterized protein {ECO:0000313|EMBL:KGO33835.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
hypothetical protein
DolZOral124_scaffold_3200_10
unknown

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comp(14952..15236)
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

DolZOral124_scaffold_3200_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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15287..16072
-----------------
DNA (786bp)
protein (262aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YBY8_9BACT
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
DolZOral124_scaffold_3200_12

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16075..17127
-----------------
DNA (1053bp)
protein (351aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQU1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD34853.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
YbbR-like protein
DolZOral124_scaffold_3200_13
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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17124..18473
-----------------
DNA (1350bp)
protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1629713 species="Bacter
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PGL7_DESSD
DolZOral124_scaffold_3200_14
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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18445..19083
-----------------
DNA (639bp)
protein (213aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NHF4_DESSD
DolZOral124_scaffold_3200_15
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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19633..21549
-----------------
DNA (1917bp)
protein (639aa)
Iron permease FTR1 id=4413957 bin=GWF2_Syntrophobacterales_56_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
iron permease FTR1; K07243 high-affinity iron transporter Tax=RBG_16_Deltaproteobacteria_58_17_curated
iron permease FTR1
DolZOral124_scaffold_3200_16
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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21628..22155
-----------------
DNA (528bp)
protein (176aa)
Periplasmic protein-probably involved in high-affinity Fe2+ transport n=2 Tax=Rhodospirillum rubrum RepID=Q2RQJ0_RHORT
hypothetical protein
Periplasmic protein-probably involved in high-affinity Fe2+ transport {ECO:0000313|EMBL:ABC23605.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiril
DolZOral124_scaffold_3200_17
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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22288..23757
-----------------
DNA (1470bp)
protein (490aa)
YHS n=2 Tax=Rhodospirillum rubrum RepID=Q2RQJ1_RHORT
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
hypothetical protein
DolZOral124_scaffold_3200_18
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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23766..25040
-----------------
DNA (1275bp)
protein (425aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUZ9_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW15538.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (stra
DolZOral124_scaffold_3200_19
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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25050..26192
-----------------
DNA (1143bp)
protein (381aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUZ8_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW15537.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (stra
DolZOral124_scaffold_3200_20
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

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26192..26857
-----------------
DNA (666bp)
protein (222aa)
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
ABC transporter related protein id=4413952 bin=GWF2_Syntrophobacterales_56_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
transporter
DolZOral124_scaffold_3200_21
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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26854..27483
-----------------
DNA (630bp)
protein (210aa)
protein disulfide reductase lipoprotein Tax=GWC2_Geobacteraceae_53_11_curated
Protein disulfide reductase lipoprotein, TlpA-like family id=3768589 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
peroxiredoxin
DolZOral124_scaffold_3200_22
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(28028..28930)
-----------------
DNA (903bp)
protein (301aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AQT4_9BACI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGK53559.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
DolZOral124_scaffold_3200_23
unknown

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comp(28930..29529)
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

DolZOral124_scaffold_3200_24
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29628..30365)
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MIF3_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP24501.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source
DolZOral124_scaffold_3200_25
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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31289..31768
-----------------
DNA (480bp)
protein (160aa)
NosL family protein n=1 Tax=uncultured bacterium RepID=K1YZ34_9BACT
NosL family protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
DolZOral124_scaffold_3200_26
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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31867..32145
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO61533.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
DolZOral124_scaffold_3200_27
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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32142..33272
-----------------
DNA (1131bp)
protein (377aa)
Putative uncharacterized protein id=2121077 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Desulfuromonadales_54_10_curated
hypothetical protein
DolZOral124_scaffold_3200_28
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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33269..33952
-----------------
DNA (684bp)
protein (228aa)
ABC transporter related protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DDS2_9GAMM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHE99404.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source
DolZOral124_scaffold_3200_29
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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33952..34941
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein id=3656379 bin=GWF2_Lentisphaerae_50_93 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Displaying 29 items

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