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DolZOral124_scaffold_3972

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_3972_1
unknown

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comp(1..957)
-----------------
DNA (957bp)
protein (319aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2CCB4
DolZOral124_scaffold_3972_2
unknown

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comp(1033..1866)
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2CCB4
DolZOral124_scaffold_3972_3
unknown

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comp(2014..3279)
-----------------
DNA (1266bp)
protein (422aa)

This feature has no annotations

DolZOral124_scaffold_3972_4
unknown

Not on your lists

comp(3354..4094)
-----------------
DNA (741bp)
protein (247aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2CCB4
DolZOral124_scaffold_3972_5
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4180..8604)
-----------------
DNA (4425bp)
protein (1475aa)
Uncharacterized protein n=1 Tax=Paenibacillus popilliae ATCC 14706 RepID=M9LNZ2_PAEPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ50636.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
DolZOral124_scaffold_3972_6
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(8709..9641)
-----------------
DNA (933bp)
protein (311aa)
Glycosyl transferase family 2 n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CY07_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFQ24494.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM
family 2 glycosyl transferase
DolZOral124_scaffold_3972_7
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9644..10033)
-----------------
DNA (390bp)
protein (130aa)
Membrane protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VJV8_CLOSH
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AGC68410.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium su
DolZOral124_scaffold_3972_8
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10036..12792)
-----------------
DNA (2757bp)
protein (919aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37707
Predicted membrane protein {ECO:0000313|EMBL:CDE12225.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Rumino
Predicted membrane protein
DolZOral124_scaffold_3972_9
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12897..13109)
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEC3_ALKOO
Uncharacterized protein {ECO:0000313|EMBL:KDR96366.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
hypothetical protein
DolZOral124_scaffold_3972_10
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13119..13553)
-----------------
DNA (435bp)
protein (145aa)
Selenium metabolism protein YedF n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S190_THEOJ
selenium metabolism protein YedF
Selenium metabolism protein YedF {ECO:0000313|EMBL:AIF51405.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
DolZOral124_scaffold_3972_11
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13563..14240)
-----------------
DNA (678bp)
protein (226aa)
Colicin V production protein n=1 Tax=Clostridium sp. CAG:273 RepID=R7L7D7_9CLOT
Colicin V production protein {ECO:0000313|EMBL:CDE83926.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr
colicin V production protein
DolZOral124_scaffold_3972_12
unknown

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comp(14249..15346)
-----------------
DNA (1098bp)
protein (366aa)

This feature has no annotations

DolZOral124_scaffold_3972_13
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15358..16479)
-----------------
DNA (1122bp)
protein (374aa)
ypsC; putative RNA methyltransferase YpsC (EC:2.1.1.-)
Putative RNA methyltransferase YpsC {ECO:0000313|EMBL:CDM69712.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDM69712.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SKX4_CLOC7
DolZOral124_scaffold_3972_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16494..17087)
-----------------
DNA (594bp)
protein (198aa)
Recombination protein RecR n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUP4_9CLOT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;
recombination protein RecR
DolZOral124_scaffold_3972_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17091..17438)
-----------------
DNA (348bp)
protein (116aa)
Nucleoid-associated protein BN653_00642 n=1 Tax=Clostridium sp. CAG:43 RepID=R7A1V2_9CLOT
Nucleoid-associated protein BN653_00642 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;"
DNA-binding protein, YbaB/EbfC family
DolZOral124_scaffold_3972_16
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17448..19136)
-----------------
DNA (1689bp)
protein (563aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ABR50847.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABR50847.1};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
DNA polymerase III, subunits gamma and tau n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TXC9_ALKMQ
DolZOral124_scaffold_3972_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19670..20857)
-----------------
DNA (1188bp)
protein (396aa)
Major facilitator superfamily protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C8E6_9CLOT
Major facilitator superfamily protein {ECO:0000313|EMBL:EOR25543.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
major facilitator superfamily MFS_1
DolZOral124_scaffold_3972_18
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21343..21594
-----------------
DNA (252bp)
protein (84aa)
Uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU12920.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 5117
DolZOral124_scaffold_3972_trna_1
unknown

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comp(21991..22075)
-----------------
DNA (85bp)
transferRNA
DolZOral124_scaffold_3972_19
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22076..22507)
-----------------
DNA (432bp)
protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geoba
adenosine deaminase n=1 Tax=Staphylococcus sp. E463 RepID=UPI0002D827CE
CMP/dCMP deaminase zinc-binding protein
DolZOral124_scaffold_3972_20
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22789..23787)
-----------------
DNA (999bp)
protein (333aa)
Diacylglycerol kinase catalytic region n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKR1_ALKOO
diacylglycerol kinase catalytic subunit
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ABW20393.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremla
DolZOral124_scaffold_3972_21
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23787..24632)
-----------------
DNA (846bp)
protein (282aa)
Putative ParB-like partition protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FD18_9CLOT
Putative ParB-like partition protein {ECO:0000313|EMBL:CDG02933.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei
spo0J; Stage 0 sporulation protein J
DolZOral124_scaffold_3972_22
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24632..25393)
-----------------
DNA (762bp)
protein (254aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TXE0_ALKMQ
cobyrinic acid a,c-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABR50858.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metallire
DolZOral124_scaffold_3972_23
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(25479..26192)
-----------------
DNA (714bp)
protein (238aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BU35_9FIRM
DolZOral124_scaffold_3972_24
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26186..28063)
-----------------
DNA (1878bp)
protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=7 Tax=Clostridium thermocellum RepID=MNMG_CLOTH
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1156417 species="Bacte
glucose inhibited division protein A
DolZOral124_scaffold_3972_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28066..29436)
-----------------
DNA (1371bp)
protein (457aa)
mnmE; tRNA modification GTPase TrmE (EC:3.6.-.-)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
tRNA modification GTPase MnmE n=6 Tax=Clostridium difficile RepID=T3SSM4_CLODI
DolZOral124_scaffold_3972_26
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29502..30122)
-----------------
DNA (621bp)
protein (207aa)
DNA-binding protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R2H3_9CLOT
putative RNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:EPR11896.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.
DolZOral124_scaffold_3972_27
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30123..30839)
-----------------
DNA (717bp)
protein (239aa)
Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PVZ9_CLOSD
oxaA; inner membrane protein OxaA
Inner membrane protein OxaA {ECO:0000313|EMBL:AHM57505.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DS
DolZOral124_scaffold_3972_28
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(30853..31062)
-----------------
DNA (210bp)
protein (70aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AFL6_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Fi
hypothetical protein
DolZOral124_scaffold_3972_29
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31059..31397)
-----------------
DNA (339bp)
protein (113aa)
Ribonuclease P protein component n=1 Tax=Clostridium sp. CAG:230 RepID=R6DHP8_9CLOT
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
rnpA; ribonuclease P
Displaying items 1-30 of 40 in total

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