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DolZOral124_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 224 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_4_1
unknown

Not on your lists

comp(445..546)
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

DolZOral124_scaffold_4_2
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1233..2825)
-----------------
DNA (1593bp)
protein (531aa)
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EEW58465.1}; EC=1.1.1.95 {ECO:0000313|EMBL:EEW58465.1};; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
Phosphoglycerate dehydrogenase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CYQ0_9RHOB
D-3-phosphoglycerate dehydrogenase
DolZOral124_scaffold_4_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2904..4046)
-----------------
DNA (1143bp)
protein (381aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00019609}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00019609};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VM26_9RHOB rbh
DolZOral124_scaffold_4_4
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4274..5146
-----------------
DNA (873bp)
protein (291aa)
Phosphoserine phosphatase SerB n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CYP8_9RHOB
Phosphoserine phosphatase {ECO:0000313|EMBL:KGM49715.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 2
phosphoserine phosphatase
DolZOral124_scaffold_4_5
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5139..5897
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JVE6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE74259.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter bae
hypothetical protein rbh
DolZOral124_scaffold_4_6
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6055..6570
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VB75_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ14208.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
DolZOral124_scaffold_4_7
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6667..7860
-----------------
DNA (1194bp)
protein (398aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849, ECO:0000256|SAAS:SAAS00181427};; 23S rRNA (adenine(2503)-C(2))-methyltrans
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NLL7_9RHOB
hypothetical protein
DolZOral124_scaffold_4_8
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7913..8362
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RW44_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW26787.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW
hypothetical protein
DolZOral124_scaffold_4_9
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8341..9189)
-----------------
DNA (849bp)
protein (283aa)
lysine decarboxylase n=1 Tax=Loktanella vestfoldensis RepID=UPI00037C603A rbh
Decarboxylase family protein {ECO:0000313|EMBL:EAQ06663.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella ves
decarboxylase family protein
DolZOral124_scaffold_4_10
Loktanella sp. S4079, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9309..10136
-----------------
DNA (828bp)
protein (276aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAA
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U3W6_9RHOB rbh
DolZOral124_scaffold_4_11
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10179..10766)
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCW2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ13986.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
DolZOral124_scaffold_4_12
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10826..11476)
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCW2_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53413.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
DolZOral124_scaffold_4_13
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11555..11881
-----------------
DNA (327bp)
protein (109aa)
Type II secretory pathway, component PulF n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2YI22_9RHOB
Type II secretory pathway, component PulF {ECO:0000313|EMBL:GAD54291.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="
hypothetical protein
DolZOral124_scaffold_4_14
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11878..12510
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCW1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ13985.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
DolZOral124_scaffold_4_15
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12514..13320
-----------------
DNA (807bp)
protein (269aa)
NnrU family protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2I7S3_9RHOB
NnrU family protein {ECO:0000313|EMBL:KCV83044.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlan
NnrU
DolZOral124_scaffold_4_16
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13406..14497)
-----------------
DNA (1092bp)
protein (364aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCW3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ13987.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
DolZOral124_scaffold_4_17
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14494..16068)
-----------------
DNA (1575bp)
protein (525aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W2P5_9RHOB rbh
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase {ECO:0000313|EMBL:KGB83576.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
hypothetical protein
DolZOral124_scaffold_4_18
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16360..17511
-----------------
DNA (1152bp)
protein (384aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000255|HAMAP-Rule:MF_01690}; Short=SDAP desuccinylase {ECO:0000255|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000255|HAMAP-Rule:MF_01690};; N-succinyl-LL-2,6
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=DAPE_RHOS1
succinyl-diaminopimelate desuccinylase
DolZOral124_scaffold_4_19
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17508..19757
-----------------
DNA (2250bp)
protein (750aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=314271 species="Bacteria; Proteobacteria; Alph
Ribonuclease R n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD12_9RHOB rbh
ribonuclease R
DolZOral124_scaffold_4_20
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19754..20434)
-----------------
DNA (681bp)
protein (227aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FS32_PELBH rbh
DolZOral124_scaffold_4_21
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20455..20952)
-----------------
DNA (498bp)
protein (166aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hy
RNA pyrophosphohydrolase n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=RPPH_ROSDO
hydrolase NUDIX family domain-containing protein
DolZOral124_scaffold_4_22
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20998..22323)
-----------------
DNA (1326bp)
protein (442aa)
Carboxyl-terminal protease family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCN7_9RHOB
Carboxyl-terminal protease family protein {ECO:0000313|EMBL:EAQ13905.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" sourc
carboxyl-terminal protease
DolZOral124_scaffold_4_23
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22335..23474)
-----------------
DNA (1140bp)
protein (380aa)
M23 family peptidase (EC:3.4.24.-)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCN8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ13906.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
DolZOral124_scaffold_4_24
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23471..24991)
-----------------
DNA (1521bp)
protein (507aa)
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CNU5_9RHOB rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
DolZOral124_scaffold_4_25
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25050..25520)
-----------------
DNA (471bp)
protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Roseovarius sp. 217 RepID=A3W4U0_9RHOB
50S rRNA methyltransferase
DolZOral124_scaffold_4_26
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25520..25981)
-----------------
DNA (462bp)
protein (154aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI0002379973
iojap-like protein
Tax=BJP_IG2158_Rhodobacterales_64_37
DolZOral124_scaffold_4_27
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26006..27400)
-----------------
DNA (1395bp)
protein (465aa)
Mechanosensitive ion channel family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCP4_9RHOB rbh
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EAQ13912.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" sou
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel
DolZOral124_scaffold_4_28
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27645..29051
-----------------
DNA (1407bp)
protein (469aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase (EC:4.2.1.33)
UPI0003D6B280 related cluster n=1 Tax=unknown RepID=UPI0003D6B280
DolZOral124_scaffold_4_29
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29063..29668
-----------------
DNA (606bp)
protein (202aa)
leuD-1; 3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DTY4_9RHOB rbh
DolZOral124_scaffold_4_30
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29837..30790
-----------------
DNA (954bp)
protein (318aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IVA4_9RHOB
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_69_12
Displaying items 1-30 of 224 in total

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