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DolZOral124_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_28_1
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..909)
DNA (909bp) protein (303aa)
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LU66_CLOCD
DolZOral124_scaffold_28_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(899..1507)
DNA (609bp) protein (203aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BE3B
1-acyl-sn-glycerol-3-phosphate acyltransferase
DolZOral124_scaffold_28_3
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1480..2103)
DNA (624bp) protein (208aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
cytidylate kinase (EC:2.7.4.14)
cytidylate kinase n=1 Tax=Anaerococcus sp. PH9 RepID=UPI0002FEBEF3
DolZOral124_scaffold_28_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2104..2640)
DNA (537bp) protein (179aa)
2-oxoglutarate synthase subunit korC {ECO:0000313|EMBL:CCQ92670.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CCQ92670.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
pyruvate/ketoisovalerate oxidoreductase subunit gamma (EC:1.2.7.3)
2-oxoglutarate synthase subunit korC n=1 Tax=Clostridium ultunense Esp RepID=M1YQ48_9CLOT
DolZOral124_scaffold_28_5
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2633..3463)
DNA (831bp) protein (277aa)
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:EMT40123.1}; EC=1.2.7.3 {ECO:0000313|EMBL:EMT40123.1};; TaxID=1198630 species="Bacteria; Firmicutes; Clostridia; Thermoan
Thiamine pyrophosphate TPP-binding domain-containing protein n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8D0Q4_THETY rbh
2-oxoglutarate ferredoxin oxidoreductase subunit beta
DolZOral124_scaffold_28_6
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3453..4595)
DNA (1143bp) protein (381aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFF1_ALKOO
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABW19114.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" sourc
DolZOral124_scaffold_28_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(4588..4869)
DNA (282bp) protein (94aa)
2-oxoglutarate oxidoreductase, delta subunit, putative n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWU3_9CLOT
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
4Fe-4S ferredoxin
DolZOral124_scaffold_28_8
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4895..5614)
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" so
Pseudouridine synthase n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J6HJT6_9FIRM
ribosomal large subunit pseudouridine synthase B
DolZOral124_scaffold_28_9
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5616..6119)
DNA (504bp) protein (168aa)
Segregation and condensation protein B n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D3K5_9FIRM
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
segregation and condensation protein B
DolZOral124_scaffold_28_10
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6112..6834)
DNA (723bp) protein (241aa)
Segregation and condensation protein A n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q0F3_CLONN
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
segregation and condensation protein A
DolZOral124_scaffold_28_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6831..8150)
DNA (1320bp) protein (440aa)
Thymidine phosphorylase {ECO:0000313|EMBL:KGG81399.1}; EC=2.4.2.4 {ECO:0000313|EMBL:KGG81399.1};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobac
pdp; pyrimidine-nucleoside phosphorylase Pdp (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UE41_9FIRM
DolZOral124_scaffold_28_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8150..9307)
DNA (1158bp) protein (386aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|H
Phosphopentomutase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DVJ3_CLOSO
phosphopentomutase
DolZOral124_scaffold_28_13
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9304..10887)
DNA (1584bp) protein (528aa)
DNA repair protein RecN n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N7A7_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilacea
recN; DNA repair protein recN
DolZOral124_scaffold_28_14
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10877..12661)
DNA (1785bp) protein (595aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S7P0_CALKI
1-deoxy-D-xylulose-5-phosphate synthase
DolZOral124_scaffold_28_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12663..13496)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q411_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23248.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
polyprenyl synthetase
DolZOral124_scaffold_28_16
unknown

Not on your lists

comp(13489..13671)
DNA (183bp) protein (61aa)

This feature has no annotations

DolZOral124_scaffold_28_17
Mycoplasma sp. CAG:611, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(13664..14857)
DNA (1194bp) protein (398aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Mycoplasma sp. CAG:611 RepID=R5Y7S0_9MOLU
DolZOral124_scaffold_28_18
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14850..15236)
DNA (387bp) protein (129aa)
N utilization substance protein B homolog n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYA4_RUMGN
transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262968 species="Bacteria; Firm
DolZOral124_scaffold_28_19
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(15239..15565)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Lactobacillus murinus ASF361 RepID=N1ZPA7_9LACO
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
hypothetical protein
DolZOral124_scaffold_28_20
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15646..15942)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UBL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERT56827.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
hypothetical protein
DolZOral124_scaffold_28_21
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15954..16511)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=EFP_ALKOO
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pep
efp; elongation factor P
DolZOral124_scaffold_28_22
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16578..17807)
DNA (1230bp) protein (410aa)
Peptidase, U32 family {ECO:0000313|EMBL:KDR94144.1}; EC=3.4.-.- {ECO:0000313|EMBL:KDR94144.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
Peptidase U32 family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DGN2_CLODI
protease
DolZOral124_scaffold_28_23
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17791..18405)
DNA (615bp) protein (205aa)
Caffeoyl-coA O-methyltransferase n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S111_FINM2
caffeoyl-CoA O-methyltransferase
rRNA small subunit methyltransferase G {ECO:0000313|EMBL:EGS32336.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY
DolZOral124_scaffold_28_24
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18395..19411)
DNA (1017bp) protein (339aa)
Putative YceG protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTV9_9CLOT
Putative YceG protein {ECO:0000313|EMBL:EOD00124.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatien
hypothetical protein
DolZOral124_scaffold_28_25
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19416..19742)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TQ81_THETC
hypothetical protein
UPF0342 protein Tthe_1268 {ECO:0000256|HAMAP-Rule:MF_01526}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoan
DolZOral124_scaffold_28_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19744..21411)
DNA (1668bp) protein (556aa)
Ribonuclease J 1 {ECO:0000313|EMBL:CCQ97583.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCQ97583.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Ribonuclease J 1 n=1 Tax=Clostridium ultunense Esp RepID=M1ZGZ6_9CLOT
RNA-metabolising metallo-beta-lactamase
DolZOral124_scaffold_28_27
unknown

Not on your lists

comp(21416..21682)
DNA (267bp) protein (89aa)

This feature has no annotations

DolZOral124_scaffold_28_28
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21660..22109)
DNA (450bp) protein (150aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=525282 specie
Putative Holliday junction resolvase n=1 Tax=Mycoplasma sp. CAG:877 RepID=R5LMV4_9MOLU
putative endonuclease involved in recombination
DolZOral124_scaffold_28_29
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22119..22397)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CK27_SYNLT
hypothetical protein
UPF0297 protein ELI_3741 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KI
DolZOral124_scaffold_28_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22415..25036)
DNA (2622bp) protein (874aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTE3_9CLOT
Displaying items 1-30 of 183 in total

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