ggKbase home page

DolZOral124_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 132 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_35_1
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

620..1915
DNA (1296bp) protein (432aa)
GTPase Obg n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GSC6_FILAD
Obg family GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; F
DolZOral124_scaffold_35_2
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1928..2221
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHK7_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM56461.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 39
DolZOral124_scaffold_35_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2230..2859
DNA (630bp) protein (210aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nicotinate/nicotinamide nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARN3_9CLOT
DolZOral124_scaffold_35_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2878..3450
DNA (573bp) protein (191aa)
HDIG domain-containing protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F667_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:AJD32351.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;
HDIG domain-containing protein
DolZOral124_scaffold_35_5
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3460..3816
DNA (357bp) protein (119aa)
Ribosomal silencing factor RsfS n=4 Tax=Clostridiales RepID=A7B2Z7_RUMGN
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacte
iojap-related protein
DolZOral124_scaffold_35_6
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3864..6329
DNA (2466bp) protein (822aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1156417 species="Bacteria; Firmic
Leucine--tRNA ligase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=SYL_ALKMQ rbh
leucyl-tRNA synthetase rbh
DolZOral124_scaffold_35_7
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6437..6814
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D4E9_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EGY79611.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 294
endoribonuclease L-PSP
DolZOral124_scaffold_35_8
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7085..8749
DNA (1665bp) protein (555aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDB8_9CLOT
Methyl-accepting chemotaxis protein TlpA {ECO:0000313|EMBL:KDR95742.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clos
methyl-accepting chemotaxis sensory transducer with Cache sensor
DolZOral124_scaffold_35_9
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8853..9173
DNA (321bp) protein (107aa)
UPF0145 protein HMPREF0634_0358 n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E1B6_9FIRM
UPF0145 protein HMPREF1639_03745 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptost
hypothetical protein
DolZOral124_scaffold_35_10
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9462..10127
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y349_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ESL02492.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC
TetR family transcriptional regulator
DolZOral124_scaffold_35_11
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10127..10843
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z5P9_9FIRM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA29446.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source=
ABC transporter ATP-binding protein
DolZOral124_scaffold_35_12
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10837..13092
DNA (2256bp) protein (752aa)
Efflux ABC transporter permease protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NM49_9FIRM rbh
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDF13178.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" sou
ABC-type transport system, involved in lipoprotein release, permease component
DolZOral124_scaffold_35_13
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13112..14188
DNA (1077bp) protein (359aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKV9_ALKMQ
RND family efflux transporter, MFP subunit
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_35_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

14253..15566
DNA (1314bp) protein (438aa)
Diguanylate cyclase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JP98_CELLD
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
diguanylate cyclase
DolZOral124_scaffold_35_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15667..16776
DNA (1110bp) protein (370aa)
Site-specific recombinase phage integrase family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y0M1_9CLOT rbh
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDA10242.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sampl
tyrosine recombinase
DolZOral124_scaffold_35_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16780..18165)
DNA (1386bp) protein (462aa)
UV-endonuclease UvdE n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1W1_CLOB8
uvsE2; UV damage endonuclease
UV-endonuclease UvdE {ECO:0000313|EMBL:ABR36591.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC
DolZOral124_scaffold_35_17
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18435..24578)
DNA (6144bp) protein (2048aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VPX3_CLOBI rbh
Uncharacterized protein {ECO:0000313|EMBL:EQK43155.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermen
DolZOral124_scaffold_35_18
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24594..26387)
DNA (1794bp) protein (598aa)
Beta-propeller domain-containing protein, methanol dehydrogenase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUB1_CLOCD
beta-propeller domain-containing protein, methanol dehydrogenase
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:AEV69543.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcacea
DolZOral124_scaffold_35_19
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26723..27295
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q2U9_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EET84183.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxid
transcriptional regulator, TetR family
DolZOral124_scaffold_35_20
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(27361..28422)
DNA (1062bp) protein (354aa)
NADP-dependent alcohol dehydrogenase {ECO:0000313|EMBL:CRH66960.1}; EC=1.1.1.2 {ECO:0000313|EMBL:CRH66960.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydop
NADP-dependent alcohol dehydrogenase n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N7K8_9FIRM
GroES-like protein
DolZOral124_scaffold_35_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28597..29721)
DNA (1125bp) protein (375aa)
Permease n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BD04_CLOBO
Permease {ECO:0000313|EMBL:EDS76650.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
permease
DolZOral124_scaffold_35_22
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29724..30950)
DNA (1227bp) protein (409aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:EOC99552.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EOC99552.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisal
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQZ6_9CLOT
DolZOral124_scaffold_35_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30992..32122)
DNA (1131bp) protein (377aa)
Membrane protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASC6_9CLOT rbh
Membrane protein {ECO:0000313|EMBL:EOC99551.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;
peptidase M23B
DolZOral124_scaffold_35_24
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32131..33027)
DNA (897bp) protein (299aa)
Cell division protein FtsX n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ12_ALKOO rbh
hypothetical protein rbh
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphil
DolZOral124_scaffold_35_25
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33017..33691)
DNA (675bp) protein (225aa)
Predicted ATPase involved in cell division n=2 Tax=Caldanaerobacter subterraneus RepID=Q8R8L8_THETN rbh
ABC transporter {ECO:0000313|EMBL:KJF27496.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
FtsE; cell division ATPase
DolZOral124_scaffold_35_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33826..34395)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain 230613 / Type F) RepID=D5W2I7_CLOB2
hypothetical protein
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIN80574.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
DolZOral124_scaffold_35_27
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34388..35110)
DNA (723bp) protein (241aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalin
Pseudouridine synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV82_9CLOT
pseudouridine synthase Rsu
DolZOral124_scaffold_35_28
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35119..35667)
DNA (549bp) protein (183aa)
segregation and condensation protein B n=1 Tax=[Clostridium] glycolicum RepID=UPI0003800FD4
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloran
segregation and condensation protein B
DolZOral124_scaffold_35_29
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35680..36432)
DNA (753bp) protein (251aa)
Segregation and condensation protein A n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0J7_CLOA9
scpA; segregation and condensation protein A
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source=
DolZOral124_scaffold_35_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36437..37684)
DNA (1248bp) protein (416aa)
Conserved domain protein n=2 Tax=Clostridium botulinum RepID=B1QPU0_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIN82204.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
Displaying items 1-30 of 132 in total

View Taxonomy