ggKbase home page

DolZOral124_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_70_1
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

518..895
DNA (378bp) protein (126aa)
Ribosomal silencing factor RsfS n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WCA7_PSYWF
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychro
DolZOral124_scaffold_70_2
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1037..1765)
DNA (729bp) protein (243aa)
Possible MutT/nudix family protein n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FQM0_PSYA2
MutT/nudix family protein
Possible MutT/nudix family protein {ECO:0000313|EMBL:AAZ19688.1}; TaxID=259536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrob
DolZOral124_scaffold_70_3
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1840..2421
DNA (582bp) protein (194aa)
ADP-ribose pyrophosphatase n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003804D30
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABQ93418.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. (strain P
DolZOral124_scaffold_70_4
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2428..4095
DNA (1668bp) protein (556aa)
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ERL56404.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ERL56404.1};; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Morax
phrB; deoxyribodipyrimidine photo-lyase type I (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4TCC7_9GAMM rbh
DolZOral124_scaffold_70_5
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4232..5977
DNA (1746bp) protein (582aa)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01569}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01569};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01569}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF
Proline--tRNA ligase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=SYP_PSYWF rbh
prolyl-tRNA synthetase
DolZOral124_scaffold_70_6
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6368..7300)
DNA (933bp) protein (311aa)
electron transfer flavoprotein subunit beta n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289E38C rbh
electron transfer flavoprotein subunit beta
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:AGP48136.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source=
DolZOral124_scaffold_70_7
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7340..8089)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI000374F583
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:EGK14725.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source
electron transfer flavoprotein subunit alpha/beta-like protein
DolZOral124_scaffold_70_8
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8323..8757)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI0002897D44
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ18393.1}; TaxID=259536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter arcti
DolZOral124_scaffold_70_9
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9050..10072)
DNA (1023bp) protein (341aa)
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
Ketol-acid reductoisomerase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=ILVC_PSYWF
ketol-acid reductoisomerase
DolZOral124_scaffold_70_10
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10259..10756)
DNA (498bp) protein (166aa)
Acetolactate synthase small subunit {ECO:0000313|EMBL:ERL56469.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ERL56469.1};; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Mor
acetolactate synthase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289928A
acetolactate synthase
DolZOral124_scaffold_70_11
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10756..12531)
DNA (1776bp) protein (592aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:EGK14731.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EGK14731.1};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Mor
Acetolactate synthase large subunit n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SNP0_9GAMM rbh
acetolactate synthase
DolZOral124_scaffold_70_12
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13078..14697)
DNA (1620bp) protein (540aa)
Sugar kinase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SP67_9GAMM rbh
NAD(P)HX epimerase {ECO:0000313|EMBL:GAF59231.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. JCM 1
hypothetical protein
DolZOral124_scaffold_70_13
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15038..16171
DNA (1134bp) protein (378aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1298608 specie
4Fe-4S ferredoxin n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000288B4A2 rbh
Epoxyqueuosine reductase
DolZOral124_scaffold_70_14
Psychrobacter sp. JCM 18901, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16256..16735)
DNA (480bp) protein (160aa)
Peptidoglycan-binding LysM n=2 Tax=Psychrobacter RepID=Q1QDF2_PSYCK
Uncharacterized protein {ECO:0000313|EMBL:GAF57158.1}; TaxID=1298609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
peptidoglycan-binding protein LysM
DolZOral124_scaffold_70_15
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16982..17218)
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI0002880F2B
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteri
acyl carrier protein
DolZOral124_scaffold_70_16
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17688..18314
DNA (627bp) protein (209aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WCZ1_PSYWF
gmk; guanylate kinase
DolZOral124_scaffold_70_17
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18447..18707
DNA (261bp) protein (87aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289BF7D
DNA-directed RNA polymerase subunit omega
DolZOral124_scaffold_70_18
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19112..21328
DNA (2217bp) protein (739aa)
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC:3.1.7.2)
GTP pyrophosphokinase, (P)ppGpp synthetase II n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T794_9GAMM rbh
GTP pyrophosphokinase, (P)ppGpp synthetase II {ECO:0000313|EMBL:GAF61952.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" sour
DolZOral124_scaffold_70_19
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21355..21750
DNA (396bp) protein (132aa)
endoribonuclease n=1 Tax=Moraxella boevrei RepID=UPI000374361C
putative endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABQ93529.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. (s
DolZOral124_scaffold_70_20
unknown

Not on your lists

21977..22738
DNA (762bp) protein (254aa)

This feature has no annotations

DolZOral124_scaffold_70_21
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22908..23651)
DNA (744bp) protein (248aa)
nucleotidyl transferase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI00028830D3
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:GAF60572.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="
nucleotidyl transferase
DolZOral124_scaffold_70_22
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23653..24765)
DNA (1113bp) protein (371aa)
aminoglycoside phosphotransferase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000287F92B rbh
Predicted phosphotransferase related to Ser/Thr protein kinase {ECO:0000313|EMBL:GAF52742.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psyc
aminoglycoside phosphotransferase
DolZOral124_scaffold_70_23
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25099..28041
DNA (2943bp) protein (981aa)
Outer membrane protein Imp, required for envelope biogenesis n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T9C0_9GAMM rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Mo
putative organic solvent tolerance protein
DolZOral124_scaffold_70_24
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28153..29157
DNA (1005bp) protein (335aa)
Chaperone SurA n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WGA4_PSYWF
PpiC-type peptidyl-prolyl cis-trans isomerase
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
DolZOral124_scaffold_70_25
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29232..29996)
DNA (765bp) protein (255aa)
Peptidase M23B n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QD09_PSYCK
Lipoprotein NlpD {ECO:0000313|EMBL:GAF60523.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. JCM 189
peptidase M23B
DolZOral124_scaffold_70_26
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30569..31027
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Psychrobacter RepID=S4YUN0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAF53911.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
hypothetical protein
DolZOral124_scaffold_70_27
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31251..32411
DNA (1161bp) protein (387aa)
dacC; penicillin-binding protein 6 (EC:3.4.16.4)
Penicillin-binding protein 6, Serine peptidase, MEROPS family S11 n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FTW2_PSYA2
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:GAF58318.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychr
DolZOral124_scaffold_70_28
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32563..33978)
DNA (1416bp) protein (472aa)
engA; GTP-binding protein EngA (EC:2.7.7.4)
GTP-binding protein Der n=1 Tax=Moraxella boevrei RepID=UPI000372B115 rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobac
DolZOral124_scaffold_70_29
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34052..34885)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. G RepID=S4YUM6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP48251.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. G
DolZOral124_scaffold_70_30
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(34945..36201)
DNA (1257bp) protein (419aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T5P4_9GAMM rbh
Displaying items 1-30 of 130 in total

View Taxonomy