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DolZOral124_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_117_1
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..582)
-----------------
DNA (582bp)
protein (194aa)
ATPase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJP0_9CLOT
ATPase {ECO:0000313|EMBL:CDC06461.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
DolZOral124_scaffold_117_2
unknown

Not on your lists

comp(1526..2053)
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

DolZOral124_scaffold_117_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2077..5259)
-----------------
DNA (3183bp)
protein (1061aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29966.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia in
DolZOral124_scaffold_117_4
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5547..6434)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003647779
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB42453.1}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobiu
DolZOral124_scaffold_117_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6569..10318
-----------------
DNA (3750bp)
protein (1250aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EQK45534.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EQK45534.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VPA8_CLOBI
DolZOral124_scaffold_117_6
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

10284..10763
-----------------
DNA (480bp)
protein (160aa)
purE_2; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCG5_DICT6
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
DolZOral124_scaffold_117_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10777..11487
-----------------
DNA (711bp)
protein (237aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Clostridiales RepID=B0NBG0_CLOSV
hypothetical protein
DolZOral124_scaffold_117_8
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11629..12975)
-----------------
DNA (1347bp)
protein (449aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DZB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89631.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
hypothetical protein
DolZOral124_scaffold_117_9
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13274..15499
-----------------
DNA (2226bp)
protein (742aa)
protease (EC:3.4.-.-)
Protease n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q891U0_CLOTE
Peptidase U32 {ECO:0000313|EMBL:KGK87860.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
DolZOral124_scaffold_117_10
unknown

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15597..15989
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

DolZOral124_scaffold_117_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15994..17361
-----------------
DNA (1368bp)
protein (456aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0Z4_9FIRM
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBK91515.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae
DolZOral124_scaffold_117_12
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17572..18162
-----------------
DNA (591bp)
protein (197aa)
PF12822 family protein n=2 Tax=unclassified Eubacteriaceae RepID=J5WR92_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
hypothetical protein
DolZOral124_scaffold_117_13
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18323..18784)
-----------------
DNA (462bp)
protein (154aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonad
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000382AA78
CMP/dCMP deaminase zinc-binding protein
DolZOral124_scaffold_117_14
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(18787..21336)
-----------------
DNA (2550bp)
protein (850aa)
Dentin sialophosphoprotein (Fragment) n=2 Tax=Homo sapiens RepID=B7SEY0_HUMAN
Dentin sialophosphoprotein {ECO:0000313|EMBL:ABX82462.1}; Flags: Fragment;; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires;
hypothetical protein
DolZOral124_scaffold_117_15
unknown

Not on your lists

comp(21326..21805)
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

DolZOral124_scaffold_117_16
unknown

Not on your lists

comp(21809..22270)
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

DolZOral124_scaffold_117_17
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22636..24276)
-----------------
DNA (1641bp)
protein (547aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FV05_DESHD
Fis family transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ACL18651.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" sourc
DolZOral124_scaffold_117_18
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24289..25167)
-----------------
DNA (879bp)
protein (293aa)
Diacylglycerol kinase catalytic region n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKR1_ALKOO
Diacylglycerol kinase {ECO:0000313|EMBL:EYE88980.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
diacylglycerol kinase catalytic subunit
DolZOral124_scaffold_117_19
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25210..25968)
-----------------
DNA (759bp)
protein (253aa)
RNA polymerase, sigma 28 subunit, FliA/WhiG family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEA9_ALKOO
FliA/WhiG family RNA polymerase sigma factor
RNA polymerase, sigma 28 subunit, FliA/WhiG family {ECO:0000313|EMBL:ABW17580.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkalip
DolZOral124_scaffold_117_20

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comp(25975..26370)
-----------------
DNA (396bp)
protein (132aa)
RsbW {ECO:0000313|EMBL:EKE27037.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EKE27037.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rsbW; serine-protein kinase RsbW (EC:2.7.11.1)
RsbW n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FYQ9_9BACT
DolZOral124_scaffold_117_21
Clostridiales bacterium S7-1-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26379..26681)
-----------------
DNA (303bp)
protein (101aa)
Anti-sigma factor antagonist n=4 Tax=Bacillus RepID=Q65N50_BACLD
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1284708 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales b
rsbV; anti-sigma-B factor antagonist RsbV
DolZOral124_scaffold_117_22
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26745..29192)
-----------------
DNA (2448bp)
protein (816aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacter
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CK51_9FIRM
DolZOral124_scaffold_117_23
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(29202..31130)
-----------------
DNA (1929bp)
protein (643aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1263011 species="Bacteria; F
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DRH9_9FIRM
DolZOral124_scaffold_117_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31149..32219)
-----------------
DNA (1071bp)
protein (357aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M798_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
recF; DNA replication and repair protein RecF
DolZOral124_scaffold_117_25
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32222..33331)
-----------------
DNA (1110bp)
protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1156417 species="Bacte
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEA1_ALKOO
DolZOral124_scaffold_117_26
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33490..34857)
-----------------
DNA (1368bp)
protein (456aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CZN4_HALOH
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiace
DolZOral124_scaffold_117_27
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35097..35858
-----------------
DNA (762bp)
protein (254aa)
sporulation initiation inhibitor Soj n=1 Tax=[Clostridium] glycolicum RepID=UPI00036DF650
Chromosome partitioning protein {ECO:0000313|EMBL:KHS56887.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobact
cobyrinic acid ac-diamide synthase
DolZOral124_scaffold_117_28
Thermoanaerobacter pseudethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

35851..36711
-----------------
DNA (861bp)
protein (287aa)
ParB-like partition protein n=2 Tax=Thermoanaerobacter RepID=B0K8H3_THEP3
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ABY95905.1}; TaxID=340099 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermo
DolZOral124_scaffold_117_29
Clostridiales bacterium S7-1-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36938..37732
-----------------
DNA (795bp)
protein (265aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WSC3_9FIRM
Phosphoesterase {ECO:0000313|EMBL:KGF07410.1}; TaxID=1284708 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S7-1-4
metallophosphoesterase
DolZOral124_scaffold_117_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37734..38993
-----------------
DNA (1260bp)
protein (420aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AS01_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOC99917.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
major facilitator superfamily protein
Displaying items 1-30 of 95 in total

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