ggKbase home page

DolZOral124_scaffold_131

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_131_1
unknown

Not on your lists

1..78
DNA (78bp) protein (26aa)

This feature has no annotations

DolZOral124_scaffold_131_2
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65..2881
DNA (2817bp) protein (939aa)
Heterodisulfide reductase {ECO:0000313|EMBL:KJR97779.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium
Related to heterodisulfide reductase, subunit A id=1969074 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
heterodisulfide reductase, subunit A
DolZOral124_scaffold_131_3
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2948..3145
DNA (198bp) protein (66aa)
methyl-viologen-reducing hydrogenase, delta subunit; K14127 F420-non-reducing hydrogenase iron-sulfur subunit D [EC:1.12.99.-] Tax=GWB2_Desulfobacterales_56_26_curated
Methyl-viologen-reducing hydrogenase, delta subunit id=1969076 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
methyl-viologen-reducing hydrogenase, delta subunit
DolZOral124_scaffold_131_4
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3361..4302
DNA (942bp) protein (314aa)
Methyl viologen-reducing hydrogenase {ECO:0000313|EMBL:KGO34740.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="
Related to methyl viologen-reducing hydrogenase, gamma chain id=1969084 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
methyl viologen-reducing hydrogenase, gamma chain
DolZOral124_scaffold_131_5
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4302..5654
DNA (1353bp) protein (451aa)
F420-nonreducing hydrogenase {ECO:0000313|EMBL:KJR97781.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacter
Probable methylviologen-reducing hydrogenase, alpha chain id=1969086 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
methylviologen-reducing hydrogenase, alpha chain
DolZOral124_scaffold_131_6
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5847..6089
DNA (243bp) protein (81aa)
Putative uncharacterized protein id=1969088 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
DolZOral124_scaffold_131_7
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6192..6917)
DNA (726bp) protein (242aa)
Hydrogenase expression protein HypC {ECO:0000313|EMBL:KJR99692.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae
Probable hydrogenase accessory protein HypB id=1978935 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypB; hydrogenase accessory protein HypB
DolZOral124_scaffold_131_8
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6973..7317)
DNA (345bp) protein (115aa)
Probable hydrogenase accessory protein HypA n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQR2_DESPS
hypA; hydrogenase accessory protein HypA
Probable hydrogenase accessory protein HypA {ECO:0000313|EMBL:CAG35311.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" sou
DolZOral124_scaffold_131_9
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7319..8341)
DNA (1023bp) protein (341aa)
Hydrogenase {ECO:0000313|EMBL:KJR99689.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
Probable hydrogenase accessory protein HypE id=1978929 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypE; hydrogenase accessory protein HypE
DolZOral124_scaffold_131_10
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8338..9462)
DNA (1125bp) protein (375aa)
Probable hydrogenase accessory protein HypD id=1978927 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypD; hydrogenase accessory protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=GWB2_Desulfobacterales_56_26_curated
hypD; hydrogenase accessory protein HypD
DolZOral124_scaffold_131_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9730..11322
DNA (1593bp) protein (531aa)
Lipopolysaccharide biosynthesis protein id=2200849 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
lipopolysaccharide biosynthesis protein Tax=GWB2_Desulfobacterales_56_26_curated
lipopolysaccharide biosynthesis protein
DolZOral124_scaffold_131_12

Not on your lists

11407..12264
DNA (858bp) protein (286aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:EKD38012.1}; EC=2.7.10.2 {ECO:0000313|EMBL:EKD38012.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
capsular exopolysaccharide family protein (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=uncultured bacterium RepID=K1YLM0_9BACT
DolZOral124_scaffold_131_13
Sulfurospirillum sp. MES, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12305..13579)
DNA (1275bp) protein (425aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.47 2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:KHG33844.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KHG33844.1};; TaxID=1565314 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Camp
O-acetylhomoserine sulfhydrolase n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H9L5_ILYPC
DolZOral124_scaffold_131_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(13596..14504)
DNA (909bp) protein (303aa)
Glycyl-radical enzyme activating protein family id=4176313 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
ferredoxin
Tax=BJP_IG2103_Bacteroidetes_41_9
DolZOral124_scaffold_131_15
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(14624..17083)
DNA (2460bp) protein (820aa)
Pyruvate formate-lyase id=4176312 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
formate acetyltransferase
Tax=BJP_IG2103_Bacteroidetes_37_22
DolZOral124_scaffold_131_16
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17402..18598)
DNA (1197bp) protein (399aa)
aromatic amino acid aminotransferase (EC:2.6.1.57)
Probable aspartate aminotransferase id=2304196 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
aspartate/tyrosine/aromatic aminotransferase Tax=GWB2_Desulfobacterales_56_26_curated
DolZOral124_scaffold_131_17
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18677..19669)
DNA (993bp) protein (331aa)
TrkA-N domain protein id=2304197 bin=GWB2_Desulfobacterales_56_26 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
TrkA domain-containing protein Tax=GWB2_Desulfobacterales_56_26_curated
TrkA domain-containing protein
DolZOral124_scaffold_131_18
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19854..21332)
DNA (1479bp) protein (493aa)
protease Do (EC:3.4.21.108)
Serine protease {ECO:0000313|EMBL:KJS00019.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.
Protease Do id=2252203 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_131_19
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21499..22839)
DNA (1341bp) protein (447aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y9M8_9BACT
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KJS00018.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfob
DolZOral124_scaffold_131_20
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22861..23409)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJP0_9DELT
hypothetical protein Tax=CG_Delta_06
hypothetical protein
DolZOral124_scaffold_131_21
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23513..24511
DNA (999bp) protein (333aa)
Outer membrane protease n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P614_DESSD
Uncharacterized protein {ECO:0000313|EMBL:KJS00016.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
outer membrane protease
DolZOral124_scaffold_131_22
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24590..25624)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
Mammalian cell entry related domain protein id=2158677 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_131_23
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25621..27306)
DNA (1686bp) protein (562aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS00014.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
Mammalian cell entry related domain protein id=2158677 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_131_24
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27303..28616)
DNA (1314bp) protein (438aa)
Probable paraquat-inducible protein A id=2158679 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
paraquat-inducible protein A; K03808 paraquat-inducible protein A Tax=GWB2_Desulfobacterales_56_26_curated
paraquat-inducible protein A
DolZOral124_scaffold_131_25
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28739..29638
DNA (900bp) protein (300aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase id=2158681 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
methyltransferase
DolZOral124_scaffold_131_26
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29640..30407
DNA (768bp) protein (256aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; De
Ribosomal protein L11 methyltransferase id=2158681 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
RNA methyltransferase, RsmE family
DolZOral124_scaffold_131_27
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30569..31888
DNA (1320bp) protein (440aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1629713 species="Bacteria;
Probable coenzyme F390 synthetase II n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANS9_DESPS
coenzyme F390 synthetase II
DolZOral124_scaffold_131_28

Not on your lists

31901..32332
DNA (432bp) protein (144aa)
ACT domain protein id=2217135 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Acetolactate synthase small subunit {ECO:0000313|EMBL:EKD37941.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACT domain-containing protein
DolZOral124_scaffold_131_29
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32361..33659
DNA (1299bp) protein (433aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1629713 species="Bacteria;
Probable coenzyme F390 synthetase id=2217133 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
coenzyme F390 synthetase
DolZOral124_scaffold_131_30
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33663..34367
DNA (705bp) protein (235aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RNPH_DESPS
ribonuclease PH
Displaying items 1-30 of 87 in total

View Taxonomy