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DolZOral124_scaffold_339

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_339_trna_1
unknown

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129..200
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_339_trna_2
unknown

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563..642
-----------------
DNA (80bp)
transferRNA
DolZOral124_scaffold_339_1
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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757..1422
-----------------
DNA (666bp)
protein (222aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N367_SLAHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV21588.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (s
DolZOral124_scaffold_339_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1569..2315
-----------------
DNA (747bp)
protein (249aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWW7_9FIRM
Flavodoxin {ECO:0000313|EMBL:KJU72886.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
4Fe-4S dicluster domain protein
DolZOral124_scaffold_339_3
Planomicrobium glaciei, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2445..3638)
-----------------
DNA (1194bp)
protein (398aa)
membrane protein n=1 Tax=Lactobacillus acidipiscis RepID=UPI0002491D4A
Uncharacterized protein {ECO:0000313|EMBL:ETP69822.1}; TaxID=1273538 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium glaciei CHR43.;"
hypothetical protein
DolZOral124_scaffold_339_4
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3803..6292)
-----------------
DNA (2490bp)
protein (830aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8K3_CLOSW rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=BJP_IG2069_Clostridiales_48_15
DolZOral124_scaffold_339_5
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6410..7087
-----------------
DNA (678bp)
protein (226aa)
Putative transcriptional regulator n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KQN8_OSCVS
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAK97320.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valeri
DolZOral124_scaffold_339_6
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7105..8097)
-----------------
DNA (993bp)
protein (331aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLD4_9FIRM
Rnase H family {ECO:0000313|EMBL:ETJ99276.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 3309
exonuclease-like protein
DolZOral124_scaffold_339_7
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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8390..8962
-----------------
DNA (573bp)
protein (191aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLD5_9FIRM
NUDIX domain protein {ECO:0000313|EMBL:EUC78440.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 3
NTP pyrophosphohydrolase
DolZOral124_scaffold_339_8
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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8952..9842
-----------------
DNA (891bp)
protein (297aa)
Tyrosine recombinase XerC n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLD6_9FIRM rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sul
xerD; tyrosine recombinase
DolZOral124_scaffold_339_9
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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9961..10299
-----------------
DNA (339bp)
protein (113aa)
50S ribosomal protein L19 n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLD7_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae
rplS; 50S ribosomal protein L19
DolZOral124_scaffold_339_10
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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10391..11239
-----------------
DNA (849bp)
protein (283aa)
Ribosome biogenesis GTPase A n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLD8_9FIRM rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium su
GTP-binding protein HSR1-related
DolZOral124_scaffold_339_11
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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11241..11903
-----------------
DNA (663bp)
protein (221aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DSL5_9FIRM
ribonuclease HII
DolZOral124_scaffold_339_12
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11909..13051)
-----------------
DNA (1143bp)
protein (381aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE0_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHO85273.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium
hypothetical protein
DolZOral124_scaffold_339_13
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13061..14449)
-----------------
DNA (1389bp)
protein (463aa)
algI; poly(beta-D-mannuronate) O-acetylase AlgI (EC:2.3.1.-)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE1_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHO85274.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium
DolZOral124_scaffold_339_14
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14439..14897)
-----------------
DNA (459bp)
protein (153aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE2_9FIRM
PF14270 domain protein {ECO:0000313|EMBL:EUC78614.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC
hypothetical protein
DolZOral124_scaffold_339_15
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14897..15712)
-----------------
DNA (816bp)
protein (272aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE3_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EUC78723.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 3558
Lysophospholipase L1 and related esterases
DolZOral124_scaffold_339_16
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15888..16562
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F6C7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE10068.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
DolZOral124_scaffold_339_17
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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16584..19250
-----------------
DNA (2667bp)
protein (889aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase ValS (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE4_9FIRM rbh
DolZOral124_scaffold_339_18
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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19252..20166
-----------------
DNA (915bp)
protein (305aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE5_9FIRM rbh
Putative lipid kinase {ECO:0000313|EMBL:EUC78546.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC
putative lipid kinase
DolZOral124_scaffold_339_19
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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20213..20674
-----------------
DNA (462bp)
protein (154aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF08891.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacter
DolZOral124_scaffold_339_20
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20697..21947
-----------------
DNA (1251bp)
protein (417aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE8_9FIRM rbh
DolZOral124_scaffold_339_21
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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21954..22967
-----------------
DNA (1014bp)
protein (338aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLE9_9FIRM rbh
putative glycerol-3-phosphate acyltransferase PlsX
DolZOral124_scaffold_339_22
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22998..23675
-----------------
DNA (678bp)
protein (226aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
RNAse III (EC:3.1.26.3)
ribonuclease III n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030C1243
DolZOral124_scaffold_339_23
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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23686..27207
-----------------
DNA (3522bp)
protein (1174aa)
Chromosome partition protein Smc n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLF1_9FIRM rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacter
chromosome segregation protein SMC
DolZOral124_scaffold_339_24
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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27305..28204
-----------------
DNA (900bp)
protein (300aa)
Signal recognition particle receptor FtsY n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLF2_9FIRM rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiale
signal recognition particle-docking protein FtsY
DolZOral124_scaffold_339_25
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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28167..29519
-----------------
DNA (1353bp)
protein (451aa)
GTPase Der n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLF3_9FIRM rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostri
engA; GTP-binding protein EngA
DolZOral124_scaffold_339_26
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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29520..30122
-----------------
DNA (603bp)
protein (201aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLF4_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
glycerol-3-phosphate acyltransferase
DolZOral124_scaffold_339_27
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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30115..31113
-----------------
DNA (999bp)
protein (333aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLF5_9FIRM rbh
glyC; glycerol-3-phosphate dehydrogenase
DolZOral124_scaffold_339_28
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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31146..32462
-----------------
DNA (1317bp)
protein (439aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLF6_9FIRM rbh
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
Displaying items 1-30 of 72 in total

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