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DolZOral124_scaffold_371

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_371_1
unknown

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comp(2..211)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

DolZOral124_scaffold_371_2
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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340..1344
-----------------
DNA (1005bp)
protein (335aa)
permease n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BDA1
Permease {ECO:0000313|EMBL:KEZ84816.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
permease
DolZOral124_scaffold_371_3
Carnobacterium maltaromaticum, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1337..2773)
-----------------
DNA (1437bp)
protein (479aa)
hypothetical protein n=1 Tax=Carnobacterium maltaromaticum RepID=UPI00026C8921 rbh
cytidylyltransferase family protein
Cytidylyltransferase family protein {ECO:0000313|EMBL:CCO10198.2}; TaxID=1234679 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium ma
DolZOral124_scaffold_371_4
GWC2_CPR2_39_10, CPR2, Bacteria

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comp(2970..3203)
-----------------
DNA (234bp)
protein (78aa)
redox-active disulfide protein 2 id=3456203 bin=GWC1_CPR2_39_9 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKQ93851.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
redox-active disulfide protein 2
DolZOral124_scaffold_371_5
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3233..3967)
-----------------
DNA (735bp)
protein (245aa)
Radical SAM domain protein n=1 Tax=Eubacterium sp. AS15 RepID=J5GEN2_9FIRM
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:EFM38903.1}; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii
DolZOral124_scaffold_371_6
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3961..5481)
-----------------
DNA (1521bp)
protein (507aa)
Glycine radical enzyme, YjjI family n=1 Tax=Eubacterium sp. AS15 RepID=J4TCD1_9FIRM
Glycine radical enzyme, YjjI family {ECO:0000313|EMBL:EJP19484.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacteri
hypothetical protein
DolZOral124_scaffold_371_7
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5612..6067)
-----------------
DNA (456bp)
protein (152aa)
Putative ribose 5-phosphate isomerase {ECO:0000313|EMBL:CCP27228.1}; EC=5.3.1.- {ECO:0000313|EMBL:CCP27228.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoa
Putative ribose 5-phosphate isomerase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LS01_TEPAE
RpiB/LacA/LacB family sugar-phosphate isomerase
DolZOral124_scaffold_371_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6072..6875)
-----------------
DNA (804bp)
protein (268aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYW9_9CLOT
DolZOral124_scaffold_371_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6890..7525)
-----------------
DNA (636bp)
protein (212aa)
Dihydroxyacetone kinase, L subunit n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CDG2_9CLOT
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:ERI65406.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 175
dihydroxyacetone kinase, L subunit
DolZOral124_scaffold_371_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7518..8531)
-----------------
DNA (1014bp)
protein (338aa)
glycerone kinase (EC:2.7.1.29)
DAK1 domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2C814_9CLOT rbh
DAK1 domain protein {ECO:0000313|EMBL:ERI65407.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
DolZOral124_scaffold_371_11
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8590..9615)
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJ72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67867.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
inner-membrane translocator
DolZOral124_scaffold_371_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9627..11111)
-----------------
DNA (1485bp)
protein (495aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C274_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG73728.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.
sugar ABC transporter ATP-binding protein
DolZOral124_scaffold_371_13
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11183..12166)
-----------------
DNA (984bp)
protein (328aa)
Sugar-binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C275_9CLOT rbh
Sugar-binding domain protein {ECO:0000313|EMBL:EEG73729.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
sugar ABC transporter periplasmic protein
DolZOral124_scaffold_371_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12293..13690)
-----------------
DNA (1398bp)
protein (466aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAN1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS67863.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
ABC transporter-like protein
DolZOral124_scaffold_371_15
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13687..14697)
-----------------
DNA (1011bp)
protein (337aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5BUU7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC58244.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigen
integral membrane sensor signal transduction histidine kinase
DolZOral124_scaffold_371_16
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14707..16326)
-----------------
DNA (1620bp)
protein (540aa)
Response regulator receiver domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C278_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG73732.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM
two component AraC family transcriptional regulator
DolZOral124_scaffold_371_17
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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16483..17508
-----------------
DNA (1026bp)
protein (342aa)
CbrA protein id=4061994 bin=GWF2_Clostridiales_36_10 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
putative oxidoreductase Tax=GWF2_Clostridiales_36_10_curated
oxidoreductase
DolZOral124_scaffold_371_18
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17701..18996)
-----------------
DNA (1296bp)
protein (432aa)
Flagellar hook-basal body protein id=1974433 bin=GWE2_Clostridiales_32_10 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales rbh
flagellar hook-basal body protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_371_19
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19059..19445)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5EA45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX85001.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
flagellar operon protein
DolZOral124_scaffold_371_20
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19438..19980)
-----------------
DNA (543bp)
protein (181aa)
Flagellar hook capping protein id=1894194 bin=GWD2_Clostridiales_32_19 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
flagellar hook capping protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_371_21
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

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comp(19989..21413)
-----------------
DNA (1425bp)
protein (475aa)
Flagellar hook-length control protein id=1894197 bin=GWD2_Clostridiales_32_19 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
flagellar hook-length control protein; K02414 flagellar hook-length control protein FliK Tax=GWD2_Clostridiales_32_19_curated
flagellar hook-length control protein
DolZOral124_scaffold_371_22
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21429..22109)
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JGA0_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_371_23
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22125..22877)
-----------------
DNA (753bp)
protein (251aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:411 RepID=R7HT45_9CLOT
DolZOral124_scaffold_371_24
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22870..23679)
-----------------
DNA (810bp)
protein (270aa)
Energy-coupling factor transporter transmembrane protein EcfT n=3 Tax=Lachnospiraceae RepID=C9LA02_BLAHA
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=537007 species="Bacter
ABC-type cobalt transport system, permease component CbiQ and related transporters
DolZOral124_scaffold_371_25
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(23676..24530)
-----------------
DNA (855bp)
protein (285aa)
ecfA2; energy-coupling factor transporter ATP-binding protein EcfA2 (EC:3.6.3.-)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Cobalt ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZG35_9CLOT
DolZOral124_scaffold_371_26
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24515..25357)
-----------------
DNA (843bp)
protein (281aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Cobalt transporter ATP-binding subunit n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F331_CLOSG rbh
cobalt transporter ATP-binding subunit
DolZOral124_scaffold_371_27
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25478..26014)
-----------------
DNA (537bp)
protein (179aa)
50S ribosomal protein L17 n=2 Tax=Coprococcus RepID=C0B6P4_9FIRM
LSU ribosomal protein L17P
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_371_28
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26042..26998)
-----------------
DNA (957bp)
protein (319aa)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N147_9FIRM
DNA-directed RNA polymerase subunit alpha
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_371_29
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27020..27613)
-----------------
DNA (594bp)
protein (198aa)
30S ribosomal protein S4 n=1 Tax=Dorea sp. CAG:317 RepID=R6WJN7_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. C
SSU ribosomal protein S4P
DolZOral124_scaffold_371_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27624..28019)
-----------------
DNA (396bp)
protein (132aa)
30S ribosomal protein S11 n=1 Tax=Clostridium sp. D5 RepID=F0YTN0_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
SSU ribosomal protein S11P
Displaying items 1-30 of 83 in total

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