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DolZOral124_scaffold_380

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_380_1
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..513)
-----------------
DNA (513bp)
protein (171aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEN82261.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEN82261.1};; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyr
Glycosyltransferase, group 2 family protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JC27_9PORP
glycosyl transferase 2
DolZOral124_scaffold_380_2
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(529..2004)
-----------------
DNA (1476bp)
protein (492aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JC26_9PORP rbh
DolZOral124_scaffold_380_3
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2185..3048)
-----------------
DNA (864bp)
protein (288aa)
Sigma-70 region 2 n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JB35_9PORP rbh
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KGN97111.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gi
rpoD; RNA polymerase sigma-70 factor
DolZOral124_scaffold_380_4
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3148..4647)
-----------------
DNA (1500bp)
protein (500aa)
protease Do (EC:3.4.21.108)
Peptidase Do n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JB33_9PORP
Deoxyribonuclease HsdR {ECO:0000313|EMBL:KGN97110.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis
DolZOral124_scaffold_380_5
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4933..5187)
-----------------
DNA (255bp)
protein (85aa)
50S ribosomal protein L31 type B n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JB31_9PORP
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphy
rpmE2; 50S ribosomal protein L31
DolZOral124_scaffold_380_6
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5354..6175)
-----------------
DNA (822bp)
protein (274aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAT0_9PORP
DolZOral124_scaffold_380_7
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6198..7718)
-----------------
DNA (1521bp)
protein (507aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAT2_9PORP rbh
DolZOral124_scaffold_380_8
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7815..9578)
-----------------
DNA (1764bp)
protein (588aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9C9_9PORP
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
DolZOral124_scaffold_380_9
Porphyromonas asaccharolytica, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9680..10186)
-----------------
DNA (507bp)
protein (169aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Porphyromonas asaccharolytica RepID=F4KMW6_PORAD
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
DolZOral124_scaffold_380_10
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10290..10667)
-----------------
DNA (378bp)
protein (126aa)
Glycine cleavage system H protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9C7_9PORP
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromon
glycine cleavage system H protein
DolZOral124_scaffold_380_11
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10898..12226
-----------------
DNA (1329bp)
protein (443aa)
MATE efflux family protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J8M9_9PORP rbh
Damage-inducible protein F {ECO:0000313|EMBL:KGN99118.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivic
DNA-damage-inducible protein F
DolZOral124_scaffold_380_12
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12290..13720)
-----------------
DNA (1431bp)
protein (477aa)
Aspartate ammonia-lyase {ECO:0000313|EMBL:KGN99067.1}; EC=4.3.1.1 {ECO:0000313|EMBL:KGN99067.1};; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyr
Putative aspartate ammonia-lyase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAM4_9PORP rbh
aspA; aspartate ammonia-lyase
DolZOral124_scaffold_380_13
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13850..16504)
-----------------
DNA (2655bp)
protein (885aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J7Z7_9PORP rbh
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:EEN83557.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" s
hypothetical protein
DolZOral124_scaffold_380_14
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16674..19502)
-----------------
DNA (2829bp)
protein (943aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00037EC85F
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KGN99125.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas
protein-export membrane protein SecD
DolZOral124_scaffold_380_15
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19847..22201
-----------------
DNA (2355bp)
protein (785aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6S0_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX96452.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
DolZOral124_scaffold_380_16
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22330..23331
-----------------
DNA (1002bp)
protein (334aa)
Lactate/malate dehydrogenase n=1 Tax=Porphyromonas asaccharolytica (strain ATCC 25260 / DSM 20707 / VPI 4198) RepID=F4KJS3_PORAD
Malate dehydrogenase {ECO:0000313|EMBL:KGN99066.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;
lactate/malate dehydrogenase
DolZOral124_scaffold_380_17
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23410..23934)
-----------------
DNA (525bp)
protein (175aa)
Flavodoxin family protein n=1 Tax=Leptotrichia sp. oral taxon 879 str. F0557 RepID=U2R8Q7_9FUSO
Flavodoxin {ECO:0000313|EMBL:GAE17126.1}; TaxID=1235809 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 6292.;"
DolZOral124_scaffold_380_18
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24127..25185)
-----------------
DNA (1059bp)
protein (353aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Por
Pseudouridine synthase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JCA0_9PORP
ribosomal large subunit pseudouridine synthase, RluA family
DolZOral124_scaffold_380_19
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25224..25877)
-----------------
DNA (654bp)
protein (218aa)
PASTA domain protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JC98_9PORP
PASTA domain protein {ECO:0000313|EMBL:EEN82159.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontalis A
hypothetical protein
DolZOral124_scaffold_380_20
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25889..27151)
-----------------
DNA (1263bp)
protein (421aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAN0_9PORP rbh
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
DolZOral124_scaffold_380_21
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27157..28668)
-----------------
DNA (1512bp)
protein (504aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAN1_9PORP rbh
DolZOral124_scaffold_380_22
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28668..30932)
-----------------
DNA (2265bp)
protein (755aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAN2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN97273.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
Cell division protein FtsI
DolZOral124_scaffold_380_23
unknown

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comp(30939..31394)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

DolZOral124_scaffold_380_24
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31534..34461)
-----------------
DNA (2928bp)
protein (976aa)
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J8T0_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN97529.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
lysyl endopeptidase
DolZOral124_scaffold_380_25
Porphyromonas asaccharolytica, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34782..35516)
-----------------
DNA (735bp)
protein (245aa)
Uncharacterized protein n=2 Tax=Porphyromonas asaccharolytica RepID=E4KT45_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE13042.1}; TaxID=879243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas asaccharoly
DolZOral124_scaffold_380_26
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35746..36750)
-----------------
DNA (1005bp)
protein (335aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J7T0_9PORP rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromo
DolZOral124_scaffold_380_27
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36751..37353)
-----------------
DNA (603bp)
protein (201aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Tannerella sp. CAG:118 RepID=R5I990_9PORP
DolZOral124_scaffold_380_28
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37355..38572)
-----------------
DNA (1218bp)
protein (406aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphy
Cysteine desulfurase n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JCF8_9PORP
aminotransferase class V
DolZOral124_scaffold_380_29
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38610..39224)
-----------------
DNA (615bp)
protein (205aa)
3'-5' exonuclease n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAM5_9PORP
3'-5' exonuclease {ECO:0000313|EMBL:KGN99110.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
3'-5' exonuclease domain-containing protein
DolZOral124_scaffold_380_30
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39226..39834)
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAM6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEN82824.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontali
hypothetical protein
Displaying items 1-30 of 61 in total

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