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DolZOral124_scaffold_430

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_430_1
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..2068
-----------------
DNA (2067bp)
protein (689aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1304284 species="Bacteria; Firmic
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CFT6_9CLOT
DolZOral124_scaffold_430_2
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2078..2461
-----------------
DNA (384bp)
protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1K7_DESRM
putative endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABO48960.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (stra
DolZOral124_scaffold_430_3
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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2509..3894
-----------------
DNA (1386bp)
protein (462aa)
1-alkyl-2-acetylglycerophosphocholine esterase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2DXU5_9BACT
isoform II
Tax=BJP_IG2102_Acholeplasmatales_34_18
DolZOral124_scaffold_430_4
Plasmodium falciparum, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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3959..5674
-----------------
DNA (1716bp)
protein (572aa)
Merozoite surface protein 9 (Fragment) n=1 Tax=Plasmodium falciparum RepID=C5HEF3_PLAFA
merozoite Surface protein 9
Merozoite surface protein 9 {ECO:0000313|EMBL:ACR10067.1}; Flags: Fragment;; TaxID=5833 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (La
DolZOral124_scaffold_430_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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5661..7283
-----------------
DNA (1623bp)
protein (541aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXG7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX72578.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ABC-type multidrug transport system, ATPase and permease components
DolZOral124_scaffold_430_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7378..8583
-----------------
DNA (1206bp)
protein (402aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59853.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ATPase
DolZOral124_scaffold_430_7
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8686..12585
-----------------
DNA (3900bp)
protein (1300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NHC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB89415.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
superfamily I DNA helicase
DolZOral124_scaffold_430_8

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12709..13587
-----------------
DNA (879bp)
protein (293aa)
YicC protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z6E3_9BACT
YicC protein {ECO:0000313|EMBL:EKD44791.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
YicC-like protein
DolZOral124_scaffold_430_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13594..14220
-----------------
DNA (627bp)
protein (209aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXF9_9CLOT
DolZOral124_scaffold_430_10
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14220..14471
-----------------
DNA (252bp)
protein (84aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
rpoZ; DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003055E88
DolZOral124_scaffold_430_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14480..15664
-----------------
DNA (1185bp)
protein (395aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=2 Tax=Clostridiales RepID=B0A9Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95978.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlet
coenzyme A biosynthesis bifunctional protein
DolZOral124_scaffold_430_12
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15666..17996
-----------------
DNA (2331bp)
protein (777aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=500633 species="Bacteria; F
Primosomal protein N n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYY4_9FIRM rbh
priA; primosomal protein N'
DolZOral124_scaffold_430_13
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18007..18462
-----------------
DNA (456bp)
protein (152aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AVU4_9CLOT
DolZOral124_scaffold_430_14
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18462..19376
-----------------
DNA (915bp)
protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1444290 species="
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BAV6_CLOBO
fmt; methionyl-tRNA formyltransferase
DolZOral124_scaffold_430_15
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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19376..20059
-----------------
DNA (684bp)
protein (228aa)
Peptidase membrane zinc metallopeptidase putative id=2207989 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
peptidase membrane zinc metallopeptidase putative; K06973 Tax=GWB2_Clostridiales_37_7_curated
conserved membrane protein of unknown function
DolZOral124_scaffold_430_16
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20061..21323
-----------------
DNA (1263bp)
protein (421aa)
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752};
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AY16_CLOA9
DolZOral124_scaffold_430_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21330..22049
-----------------
DNA (720bp)
protein (240aa)
Serine/threonine phosphatase stp {ECO:0000313|EMBL:CCQ96060.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CCQ96060.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DEC7E1
protein serine/threonine phosphatase
DolZOral124_scaffold_430_18
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22043..23971
-----------------
DNA (1929bp)
protein (643aa)
sps; serine/threonine-protein kinase Sps (EC:2.7.11.1)
Serine/threonine-protein kinase Sps {ECO:0000313|EMBL:AFS78685.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AFS78685.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" s
Serine/threonine-protein kinase Sps n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B157_CLOA9
DolZOral124_scaffold_430_19
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23973..24818
-----------------
DNA (846bp)
protein (282aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptos
rsgA; ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYZ6_9FIRM
DolZOral124_scaffold_430_20
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24769..25470
-----------------
DNA (702bp)
protein (234aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
Ribulose-phosphate 3-epimerase n=2 Tax=Clostridium bifermentans RepID=T4VSS3_CLOBI
ribulose-phosphate 3-epimerase
DolZOral124_scaffold_430_21
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

25463..26083
-----------------
DNA (621bp)
protein (207aa)
thiN; thiamine pyrophosphokinase (EC:2.7.6.2); K00949 thiamine pyrophosphokinase [EC:2.7.6.2] Tax=CG_Caldi_01
Thiamine pyrophosphokinase id=1963657 bin=GWB2_Clostridiales_37_7 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
thiamine pyrophosphokinase
DolZOral124_scaffold_430_22
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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26188..27873
-----------------
DNA (1686bp)
protein (562aa)
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WG63_9BACI
5'-nucleotidase {ECO:0000313|EMBL:EWG09925.1}; TaxID=1307436 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus firmus DS1.;"
5'-nucleotidase domain-containing protein
DolZOral124_scaffold_430_23
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

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27917..28402
-----------------
DNA (486bp)
protein (162aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9DZN8_CLOK1
flavodoxin Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_13_curated
hypothetical protein
DolZOral124_scaffold_430_24
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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28383..29033
-----------------
DNA (651bp)
protein (217aa)
NUDIX hydrolase Tax=GWD1_Spirochaetes_27_9_curated
phosphohydrolase (MutT/NUDIX family protein) id=126684 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
phosphohydrolase
DolZOral124_scaffold_430_25
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29151..30080
-----------------
DNA (930bp)
protein (310aa)
Anaerobic cobalt chelatase cbiK n=1 Tax=Clostridium tetani 12124569 RepID=U6EWJ8_CLOTA
cbiK; anaerobic cobalt chelatase cbiK
Anaerobic cobalt chelatase cbiK {ECO:0000313|EMBL:CDI48799.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 1212456
DolZOral124_scaffold_430_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30082..31080
-----------------
DNA (999bp)
protein (333aa)
Putative iron compound ABC transporter, periplasmic iron compound-binding protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0B9_CLOBA
putative iron compound ABC transporter periplasmic iron compound-binding protein
Putative iron compound ABC transporter, periplasmic iron compound-binding protein {ECO:0000313|EMBL:EES48699.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
DolZOral124_scaffold_430_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31073..32131
-----------------
DNA (1059bp)
protein (353aa)
FecCD transport family protein n=2 Tax=Clostridium sordellii RepID=T0DZ00_CLOSO rbh
HmuU protein {ECO:0000313|EMBL:CEO07443.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
HmuU protein
DolZOral124_scaffold_430_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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32128..32886
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43204.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
iron chelate uptake ABC transporter, FeCT family, ATP-binding protein
DolZOral124_scaffold_430_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32975..34012)
-----------------
DNA (1038bp)
protein (346aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium botulinum Bf RepID=B1QNZ5_CLOBO
Integrase {ECO:0000313|EMBL:KIN81957.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
phage integrase family site-specific recombinase
DolZOral124_scaffold_430_30
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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comp(34068..34277)
-----------------
DNA (210bp)
protein (70aa)
Conserved uncharacterized protein, UPF0150 id=3848174 bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
hypothetical protein
Displaying items 1-30 of 88 in total

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