ggKbase home page

DolZOral124_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_475_1
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..297)
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YTH5_CAPCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK22837.1}; TaxID=860228 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cani
DolZOral124_scaffold_475_2
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(442..1092)
-----------------
DNA (651bp)
protein (217aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00036932E8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJR03379.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthi
DolZOral124_scaffold_475_3
Acinetobacter bouvetii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1606..2085)
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZH4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV83688.1}; TaxID=1120925 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter bouv
hypothetical protein
DolZOral124_scaffold_475_4
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2111..4207)
-----------------
DNA (2097bp)
protein (699aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SSF0_9GAMM rbh
metG; methionyl-tRNA synthetase
DolZOral124_scaffold_475_5
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4400..5101
-----------------
DNA (702bp)
protein (234aa)
Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit {ECO:0000313|EMBL:ERL54904.1}; EC=2.8.3.8 {ECO:0000313|EMBL:ERL54904.1};; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ps
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Psychrobacter lutiphocae RepID=UPI00037F2EB3 rbh
succinyl-CoA:3-ketoacid-CoA transferase
DolZOral124_scaffold_475_6
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5137..5772
-----------------
DNA (636bp)
protein (212aa)
3-oxoadipate CoA-succinyl transferase {ECO:0000313|EMBL:EGK10148.1}; EC=2.8.3.5 {ECO:0000313|EMBL:EGK10148.1};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; M
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Psychrobacter lutiphocae RepID=UPI00036829EF rbh
3-oxoacid CoA-transferase subunit B
DolZOral124_scaffold_475_7
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6098..7843
-----------------
DNA (1746bp)
protein (582aa)
AMP-binding protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI0002894503 rbh
AMP-binding domain-containing protein
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ERL55437.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychr
DolZOral124_scaffold_475_8
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7952..9694
-----------------
DNA (1743bp)
protein (581aa)
AMP-binding protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI000369F67D
Acetoacetyl-CoA synthetase {ECO:0000313|EMBL:GAF57733.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter s
AMP-binding domain-containing protein
DolZOral124_scaffold_475_9
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9807..11417
-----------------
DNA (1611bp)
protein (537aa)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ABE74124.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABE74124.1};; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae;
Propionyl-CoA carboxylase n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QDX9_PSYCK rbh
propionyl-CoA carboxylase
DolZOral124_scaffold_475_10
unknown

Not on your lists

11676..12314
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003723DA3
DolZOral124_scaffold_475_11
unknown

Not on your lists

12274..12384
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

DolZOral124_scaffold_475_12
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12332..13141
-----------------
DNA (810bp)
protein (270aa)
enoyl-CoA hydratase n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003778C15 rbh
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABQ95006.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
DolZOral124_scaffold_475_13
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13258..15372
-----------------
DNA (2115bp)
protein (705aa)
Methylcrotonyl-CoA carboxylase {ECO:0000313|EMBL:EGK08109.1}; EC=6.4.1.4 {ECO:0000313|EMBL:EGK08109.1};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxell
Methylcrotonyl-CoA carboxylase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5STL2_9GAMM rbh
carbamoyl-phosphate synthase subunit L
DolZOral124_scaffold_475_14
unknown

Not on your lists

15580..16023
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

DolZOral124_scaffold_475_15
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16060..16974
-----------------
DNA (915bp)
protein (305aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Psychrobacter sp. G RepID=S4YSK7_9GAMM
hydroxymethylglutaryl-CoA lyase
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AGP47969.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobact
DolZOral124_scaffold_475_16
CG_Magasa_02, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

17173..17973
-----------------
DNA (801bp)
protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VM78_CLOBI
hypothetical protein Tax=CG_Magasa_02
DolZOral124_scaffold_475_17
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18096..19274
-----------------
DNA (1179bp)
protein (393aa)
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:ABE74128.1}; EC=1.3.8.4 {ECO:0000313|EMBL:ABE74128.1};; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellace
Isovaleryl-CoA dehydrogenase n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QDX5_PSYCK rbh
acyl-CoA dehydrogenase-like protein
DolZOral124_scaffold_475_18
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19448..20305
-----------------
DNA (858bp)
protein (286aa)
Uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYB2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EEV22786.1}; TaxID=553217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Enhydrobacter.;" source="Enhydrobacter aeros
ATP-binding protein
DolZOral124_scaffold_475_19
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20305..21327
-----------------
DNA (1023bp)
protein (341aa)
hypothetical protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI00028A3496
Uncharacterized protein {ECO:0000313|EMBL:GAF62542.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
hypothetical protein
DolZOral124_scaffold_475_20
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21435..22010
-----------------
DNA (576bp)
protein (192aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1002339 species="
Deoxycytidine triphosphate deaminase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SSE2_9GAMM rbh
dcd; deoxycytidine triphosphate deaminase
DolZOral124_scaffold_475_21
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22129..22416
-----------------
DNA (288bp)
protein (96aa)
Putative polyhydroxyalkanoic acid system protein n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WI30_PSYWF
putative polyhydroxyalkanoic acid system protein
Putative polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:ABQ95321.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" so
DolZOral124_scaffold_475_22
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22540..22971)
-----------------
DNA (432bp)
protein (144aa)
peptidase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000287B987
Stringent starvation protein B {ECO:0000313|EMBL:GAF52862.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobact
peptidase
DolZOral124_scaffold_475_23
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23003..23626)
-----------------
DNA (624bp)
protein (208aa)
Possible stringent starvation protein A n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FRT7_PSYA2
sspA; stringent starvation protein A
Stringent starvation protein A {ECO:0000313|EMBL:GAF52863.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobact
DolZOral124_scaffold_475_24
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23813..24199)
-----------------
DNA (387bp)
protein (129aa)
30S ribosomal protein S9 n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003749476
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrob
DolZOral124_scaffold_475_25
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24213..24641)
-----------------
DNA (429bp)
protein (143aa)
50S ribosomal protein L13 n=10 Tax=Moraxella catarrhalis RepID=D5VD60_MORCR
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=749219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxel
DolZOral124_scaffold_475_26
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24804..25421)
-----------------
DNA (618bp)
protein (206aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pse
hypothetical protein n=1 Tax=Moraxella boevrei RepID=UPI0003710AA3
RNA methyltransferase, RsmD family
DolZOral124_scaffold_475_27
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25448..27655)
-----------------
DNA (2208bp)
protein (736aa)
Penicillin-binding protein 2 {ECO:0000313|EMBL:EGK14988.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EGK14988.1};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxell
Penicillin-binding protein 2 n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SNA5_9GAMM
peptidoglycan glycosyltransferase
DolZOral124_scaffold_475_28
unknown

Not on your lists

comp(27765..27914)
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

DolZOral124_scaffold_475_29
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28065..29381
-----------------
DNA (1317bp)
protein (439aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SNA4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK14987.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
hypothetical protein
DolZOral124_scaffold_475_30
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29489..29746
-----------------
DNA (258bp)
protein (86aa)
UPI0003CED51E related cluster n=1 Tax=unknown RepID=UPI0003CED51E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY68197.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Displaying items 1-30 of 67 in total

View Taxonomy