ggKbase home page

DolZOral124_scaffold_484

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_484_1
unknown

Not on your lists

2..79
DNA (78bp) protein (26aa)

This feature has no annotations

DolZOral124_scaffold_484_2
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


654..962
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FUJ7_9RHOB
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius
rpsJ; 30S ribosomal protein S10
DolZOral124_scaffold_484_3
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


973..1707
DNA (735bp) protein (245aa)
50S ribosomal protein L3 n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AVJ5_9RHOB rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium
rplC; ribosomal protein L3
DolZOral124_scaffold_484_4
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1704..2321
DNA (618bp) protein (206aa)
50S ribosomal protein L4 n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F2C337 rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp
50S ribosomal protein L4
DolZOral124_scaffold_484_5
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2318..2614
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=2 Tax=Phaeobacter RepID=I7ET76_PHAG2
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalasso
rplW; 50S ribosomal protein L23
DolZOral124_scaffold_484_6
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2708..3487)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQ41_9RHOB rbh
ArpA protein {ECO:0000313|EMBL:KIC44074.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
hypothetical protein
DolZOral124_scaffold_484_7
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3831..4673
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Ruegeria sp. R11 RepID=B7QX10_9RHOB rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter
rplB; 50S ribosomal protein L2 rbh
DolZOral124_scaffold_484_8
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4677..4955
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=4 Tax=Rhodobacteraceae RepID=I7EIG1_PHAIB
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter
DolZOral124_scaffold_484_9
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4959..5339
DNA (381bp) protein (127aa)
50S ribosomal protein L22 n=3 Tax=Rhodobacteraceae RepID=I7DIF8_PHAG2
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodo
rplV; 50S ribosomal protein L22
DolZOral124_scaffold_484_10
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5339..6046
DNA (708bp) protein (236aa)
30S ribosomal protein S3 n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NRW0_9RHOB rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. AN
rpsC; 30S ribosomal protein S3
DolZOral124_scaffold_484_11
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6059..6472
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=2 Tax=Phaeobacter RepID=I7DL98_PHAIB
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rue
DolZOral124_scaffold_484_12
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6745..7464)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3KAZ5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIC49612.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. A
hypothetical protein
DolZOral124_scaffold_484_13
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7591..8211)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Ruegeria pomeroyi RepID=Q5LW52_RUEPO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV93808.2}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
DolZOral124_scaffold_484_14
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8930..9139
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D6W2_9RHOB
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" source="Thalassobiu
rpmC; ribosomal protein L29
DolZOral124_scaffold_484_15
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9155..9385
DNA (231bp) protein (77aa)
30S ribosomal protein S17 n=1 Tax=Ruegeria conchae RepID=UPI0002378A68
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacteriu
rpsQ; 30S ribosomal protein S17
DolZOral124_scaffold_484_16
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9468..9836
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Rhodobacteraceae RepID=RL14_DINSH
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinorose
DolZOral124_scaffold_484_17
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9838..10149
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SHZ1_9RHOB
rplX; ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius n
DolZOral124_scaffold_484_18
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10142..10705
DNA (564bp) protein (188aa)
50S ribosomal protein L5 n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F90352 rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp
50S ribosomal protein L5 rbh
DolZOral124_scaffold_484_19
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10721..11026
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=2 Tax=Sulfitobacter RepID=A3S838_9RHOB
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria
rpsN; 30S ribosomal protein S14
DolZOral124_scaffold_484_20
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11040..11432
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JRB1_9RHOB
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacte
rpsH; ribosomal protein S8
DolZOral124_scaffold_484_21
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11443..11976
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=RL6_DINSH rbh
rplF; 50S ribosomal protein L6 rbh
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseo
DolZOral124_scaffold_484_22
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11988..12347
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=2 Tax=Sulfitobacter RepID=A3S835_9RHOB
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria
rplR; ribosomal protein L18
DolZOral124_scaffold_484_23
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12459..13028
DNA (570bp) protein (190aa)
30S ribosomal protein S5 n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EWS0_9RHOB
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Acti
rpsE; 30S ribosomal protein S5
DolZOral124_scaffold_484_24
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13041..13229
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00031D1498
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Lei
50S ribosomal protein L30
DolZOral124_scaffold_484_25
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13377..13835
DNA (459bp) protein (153aa)
Ribose 5-phosphate isomerase B n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VJP1_9RHOB
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:KHQ53464.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccu
ribose-5-phosphate isomerase
DolZOral124_scaffold_484_26
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14122..14928)
DNA (807bp) protein (269aa)
2-oxo-hept-3-ene-1,7-dioate hydratase n=1 Tax=Ruegeria conchae RepID=UPI000237B247 rbh
2-oxo-hepta-3-ene-1,7-dioate hydratase {ECO:0000313|EMBL:KIC40573.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruege
2-oxo-hepta-3-ene-1,7-dioic acid hydratase
DolZOral124_scaffold_484_27
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14925..15779)
DNA (855bp) protein (285aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Ruegeria conchae RepID=UPI000237B246 rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KIC40574.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source
5-carboxymethyl-2-hydroxymuconate delta-isomerase
DolZOral124_scaffold_484_28
unknown

Not on your lists

comp(15830..15982)
DNA (153bp) protein (51aa)

This feature has no annotations

DolZOral124_scaffold_484_29
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15979..16833)
DNA (855bp) protein (285aa)
hpcB; 3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC:1.13.11.15)
3,4-dihydroxyphenylacetate 2,3-dioxygenase n=1 Tax=Ruegeria conchae RepID=UPI000237B245 rbh
3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:EAQ45263.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source=
DolZOral124_scaffold_484_30
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16848..18356)
DNA (1509bp) protein (503aa)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC:1.2.1.60) rbh
betaine-aldehyde dehydrogenase n=1 Tax=Ruegeria conchae RepID=UPI000237B244 rbh
5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:EAQ45262.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacte
Displaying items 1-30 of 130 in total

View Taxonomy