ggKbase home page

DolZOral124_scaffold_534

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_534_1
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

385..2007
-----------------
DNA (1623bp)
protein (541aa)
Sodium-dependent phosphate transporter n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWB1_CLOSD
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KDR93840.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostr
sodium-dependent phosphate transporter
DolZOral124_scaffold_534_2
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2128..2724
-----------------
DNA (597bp)
protein (199aa)
30S ribosomal protein S4 B n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=RS4B_ALKMQ
30S ribosomal protein S4
30S ribosomal protein S4 B {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigen
DolZOral124_scaffold_534_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2871..4283)
-----------------
DNA (1413bp)
protein (471aa)
dacF3; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARM8_9CLOT
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KGG80178.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacte
DolZOral124_scaffold_534_4
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4438..4815
-----------------
DNA (378bp)
protein (126aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I352_9BACL
hypothetical protein Tax=CG_Delta_01
competence protein ComEA helix-hairpin-helix repeat protein
DolZOral124_scaffold_534_5
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4929..5618
-----------------
DNA (690bp)
protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARM2_9CLOT
PhoP family transcriptional regulator {ECO:0000313|EMBL:KGG80171.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobac
two component transcriptional regulator
DolZOral124_scaffold_534_6
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5611..7041
-----------------
DNA (1431bp)
protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacte
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1Y8_MAHA5
integral membrane sensor signal transduction histidine kinase
DolZOral124_scaffold_534_7
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7038..7907
-----------------
DNA (870bp)
protein (290aa)
Lipoprotein LpqB, GerMN domain protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNE0_CLOSH
Uncharacterized protein {ECO:0000313|EMBL:EYE87558.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.
lipoprotein LpqB, GerMN domain-containing protein
DolZOral124_scaffold_534_8
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8007..9014
-----------------
DNA (1008bp)
protein (336aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Prs {ECO:0000313|EMBL:AGC68393.1}; EC=2.7.6.1 {ECO:0000313|EMBL:AGC68393.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VS36_CLOSH
DolZOral124_scaffold_534_9
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9017..11188
-----------------
DNA (2172bp)
protein (724aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="
ATP-dependent DNA helicase PcrA n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L444_9BACI
ATP-dependent DNA helicase PcrA
DolZOral124_scaffold_534_10
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11193..13193
-----------------
DNA (2001bp)
protein (667aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase LigA n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002EB6F33
DolZOral124_scaffold_534_11
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13217..13648
-----------------
DNA (432bp)
protein (144aa)
anti-sigma regulatory factor n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BE5C
anti-sigma regulatory factor
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_534_12
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13629..13934
-----------------
DNA (306bp)
protein (102aa)
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_534_13
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13941..15119
-----------------
DNA (1179bp)
protein (393aa)
Putative Phosphoserine phosphatase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PX42_CLOSD
response regulator receiver modulated serine phosphatase
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_534_14
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15116..15835
-----------------
DNA (720bp)
protein (240aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RTU7_9CLOT
rph; ribonuclease PH
DolZOral124_scaffold_534_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15835..16437
-----------------
DNA (603bp)
protein (201aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=2 Tax=Clostridium botulinum RepID=B1INF2_CLOBK
deoxyribonucleotide triphosphate pyrophosphatase
DolZOral124_scaffold_534_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16470..17690
-----------------
DNA (1221bp)
protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CIQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27076.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
DolZOral124_scaffold_534_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

17737..18621
-----------------
DNA (885bp)
protein (295aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73484.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
PhzF family phenazine biosynthesis protein
DolZOral124_scaffold_534_18
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18638..19354
-----------------
DNA (717bp)
protein (239aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TN69_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR47637.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus me
DolZOral124_scaffold_534_19
unknown

Not on your lists

comp(19368..19760)
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

DolZOral124_scaffold_534_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19768..21216)
-----------------
DNA (1449bp)
protein (483aa)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00015246};; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:00
leucyl aminopeptidase (EC:3.4.11.1)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F9D575
DolZOral124_scaffold_534_21
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21654..24044
-----------------
DNA (2391bp)
protein (797aa)
peptidase S16 with C-terminal Lon domain (EC:3.4.21.-)
Peptidase S16 with C-terminal Lon domain {ECO:0000313|EMBL:AFS79551.1}; EC=3.4.21.- {ECO:0000313|EMBL:AFS79551.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia
Peptidase S16 with C-terminal Lon domain n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B4Q3_CLOA9
DolZOral124_scaffold_534_22
GWE2_OP11_38_30, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

24134..24526
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=Streptococcus parauberis NCFD 2020 RepID=F1Z2J9_9STRE
Uncharacterized protein {ECO:0000313|EMBL:KKQ70474.1}; TaxID=1618490 species="Bacteria; Microgenomates.;" source="Microgenomates (Shapirobacteria) bacterium GW2011_GWE2_38_30.;"
conserved membrane protein of unknown function
DolZOral124_scaffold_534_23
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

24610..25536
-----------------
DNA (927bp)
protein (309aa)
binding-protein-dependent transport system inner membrane protein; K15581 oligopeptide transport system permease protein Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Binding-protein-dependent transport systems inner membrane component id=3439126 bin=GWB1_Spirochaetales_60_80 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes rbh
Oligopeptide transport system permease protein OppB
DolZOral124_scaffold_534_24
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

25539..26726
-----------------
DNA (1188bp)
protein (396aa)
ABC transporter transmembrane protein id=1267210 bin=GWE1_Spirochaete_60_18 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
ABC transporter permease; K15582 oligopeptide transport system permease protein Tax=GWB1_Spirochaetes_60_80_curated
binding-protein-dependent transport system inner membrane protein
DolZOral124_scaffold_534_25
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

26733..27752
-----------------
DNA (1020bp)
protein (340aa)
peptide ABC transporter, ATP-binding protein Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Oligopeptide/dipeptide ABC transporter, ATPase subunit id=3439134 bin=GWB1_Spirochaetales_60_80 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
Oligopeptide transport ATP-binding protein OppD
DolZOral124_scaffold_534_26
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

27752..28735
-----------------
DNA (984bp)
protein (328aa)
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Oligopeptide/dipeptide ABC transporter, ATPase subunit id=2986909 bin=GWF1_Spirochaetes_60_12 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Oligopeptide transport ATP-binding protein OppF
DolZOral124_scaffold_534_27
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

28870..30552
-----------------
DNA (1683bp)
protein (561aa)
ABC transporter periplasmic protein id=3439123 bin=GWB1_Spirochaetales_60_80 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes rbh
ABC transporter substrate-binding protein; K15580 oligopeptide transport system substrate-binding protein Tax=GWB1_Spirochaetes_60_80_curated
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
DolZOral124_scaffold_534_28
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(30610..31488)
-----------------
DNA (879bp)
protein (293aa)
mutM; formamidopyrimidine-DNA glycosidase (EC:3.2.2.23 4.2.99.18) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
Formamidopyrimidine-DNA glycosylase n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RXB5_9BACT
formamidopyrimidine-DNA glycosylase
DolZOral124_scaffold_534_29
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

31612..31854
-----------------
DNA (243bp)
protein (81aa)
Prevent-host-death family protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MPY1_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:CDB96301.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
toxin-antitoxin system, antitoxin component, PHD family
DolZOral124_scaffold_534_30
Mobiluncus mulieris, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31851..32249
-----------------
DNA (399bp)
protein (133aa)
Death-on-curing family protein n=3 Tax=Mobiluncus mulieris RepID=C2KNP8_9ACTO
Death-on-curing family protein {ECO:0000313|EMBL:EFM46226.1}; TaxID=871571 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus mulieris ATCC 35239.;"
death-on-curing family protein
Displaying items 1-30 of 58 in total

View Taxonomy