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DolZOral124_scaffold_539

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_539_1
unknown

Not on your lists

comp(1..219)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

DolZOral124_scaffold_539_2
unknown

Not on your lists

comp(236..469)
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

DolZOral124_scaffold_539_3
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

Not on your lists

comp(705..1748)
-----------------
DNA (1044bp)
protein (348aa)
Alcohol dehydrogenase n=1 Tax=Chondrus crispus RepID=R7QBJ9_CHOCR
Alcohol dehydrogenase {ECO:0000313|EMBL:CDF34840.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss
zinc-containing alcohol dehydrogenase
DolZOral124_scaffold_539_4
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1948..3066)
-----------------
DNA (1119bp)
protein (373aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PDE0_9CLOT
signal transduction histidine kinase
DolZOral124_scaffold_539_5
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3053..3733)
-----------------
DNA (681bp)
protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MF11_ALKOO
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABW18490.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" sourc
DolZOral124_scaffold_539_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3818..5371)
-----------------
DNA (1554bp)
protein (518aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IAT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61434.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter
DolZOral124_scaffold_539_7
Clostridium sp. CAG:492, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5684..7459
-----------------
DNA (1776bp)
protein (592aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:492 RepID=R5Z167_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDA30439.1}; TaxID=1262813 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
myosin-crossreactive antigen
DolZOral124_scaffold_539_8
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7605..9296
-----------------
DNA (1692bp)
protein (564aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CMA1_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ESE29981.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium b
coenzyme A disulfide reductase
DolZOral124_scaffold_539_9
Vibrio caribbeanicus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9457..13977)
-----------------
DNA (4521bp)
protein (1507aa)
hypothetical protein n=1 Tax=Algicola sagamiensis RepID=UPI000361BA8A
Methyl-accepting chemotaxis transducer/sensory box protein {ECO:0000313|EMBL:EFP98227.1}; TaxID=796620 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" sour
methyl-accepting chemotaxis transducer/sensory box protein
DolZOral124_scaffold_539_10
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14136..17849)
-----------------
DNA (3714bp)
protein (1238aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JHP0_9FIRM
DNA-directed RNA polymerase subunit beta'
DolZOral124_scaffold_539_11
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17940..24431)
-----------------
DNA (6492bp)
protein (2164aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Caloramator australicus RC3 RepID=I7LK49_9CLOT
DolZOral124_scaffold_539_12
unknown

Not on your lists

25078..26664
-----------------
DNA (1587bp)
protein (529aa)

This feature has no annotations

DolZOral124_scaffold_539_13
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27154..27309)
-----------------
DNA (156bp)
protein (52aa)
Transposase, mutator family n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7UV84_9FIRM
Transposase, mutator family {ECO:0000313|EMBL:ERT62819.1}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;
DolZOral124_scaffold_539_14
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27758..29149)
-----------------
DNA (1392bp)
protein (464aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CEK0_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ESE29733.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" sour
branched chain amino acid transport system carrier protein
DolZOral124_scaffold_539_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29507..29980)
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum F RepID=A7GDJ4_CLOBL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS42117.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Lange
DolZOral124_scaffold_539_16
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29986..32007)
-----------------
DNA (2022bp)
protein (674aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
ftsH3; ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CFQ2_9CLOT
DolZOral124_scaffold_539_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32063..33463)
-----------------
DNA (1401bp)
protein (467aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L9_9CLOT
DolZOral124_scaffold_539_18
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33570..34760
-----------------
DNA (1191bp)
protein (397aa)
Transporter, major facilitator family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D947_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI93305.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 st
MDR-type permease
DolZOral124_scaffold_539_19
Treponema pedis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(34855..35025)
-----------------
DNA (171bp)
protein (57aa)
Uncharacterized protein n=1 Tax=Treponema pedis str. T A4 RepID=S5ZS14_9SPIO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT42850.1}; TaxID=1291379 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema pedis str. T A4.;"
DolZOral124_scaffold_539_20
Leptotrichia goodfellowii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(35026..35604)
-----------------
DNA (579bp)
protein (193aa)
Methyltransferase domain protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GM62_9FUSO
Methyltransferase domain protein {ECO:0000313|EMBL:EEY34803.1}; TaxID=596323 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia goodfellowii F0264
putative methyltransferase
DolZOral124_scaffold_539_21
unknown

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comp(35647..36462)
-----------------
DNA (816bp)
protein (272aa)

This feature has no annotations

DolZOral124_scaffold_539_22
unknown

Not on your lists

comp(36463..36990)
-----------------
DNA (528bp)
protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMS9_CLOSH
hypothetical protein
DolZOral124_scaffold_539_23
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37018..38397)
-----------------
DNA (1380bp)
protein (460aa)
HtrA2 peptidase (EC:3.4.21.108)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Clostridium sp. CAG:273 RepID=R7L3H7_9CLOT
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:CDE82548.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmenta
DolZOral124_scaffold_539_24
unknown

Not on your lists

comp(38483..39013)
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

DolZOral124_scaffold_539_25
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39041..40864)
-----------------
DNA (1824bp)
protein (608aa)
Hsp90 protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XNU2_9FIRM
Hsp90 protein {ECO:0000313|EMBL:ESL03849.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
molecular chaperone of HSP90 family
DolZOral124_scaffold_539_26
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41051..41980)
-----------------
DNA (930bp)
protein (310aa)
NYN domain protein n=2 Tax=unclassified Eubacteriaceae RepID=J6H746_9FIRM rbh
NYN domain protein {ECO:0000313|EMBL:EJU21070.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
hypothetical protein
DolZOral124_scaffold_539_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42052..42675)
-----------------
DNA (624bp)
protein (208aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R5Q1_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Calo
rex; redox-sensing transcriptional repressor Rex
DolZOral124_scaffold_539_28
Streptococcus canis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(42791..43810)
-----------------
DNA (1020bp)
protein (340aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=482234 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptoco
lplA; lipoate-protein ligase A (EC:2.7.7.63)
lipoate-protein ligase A n=1 Tax=Streptococcus didelphis RepID=UPI000369C972 rbh
DolZOral124_scaffold_539_29
Streptococcus dysgalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(43836..44708)
-----------------
DNA (873bp)
protein (291aa)
SIR2 family protein n=1 Tax=Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 RepID=E7PY16_STRDY
SIR2 family protein
SIR2 family protein {ECO:0000313|EMBL:BAM61138.1}; TaxID=617121 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus dysgalactiae subsp. eq
DolZOral124_scaffold_539_30
Streptococcus dysgalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(44701..45501)
-----------------
DNA (801bp)
protein (267aa)
hypothetical protein n=1 Tax=Streptococcus didelphis RepID=UPI00037F91CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM61139.1}; TaxID=617121 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus dysgalactiae subsp
Displaying items 1-30 of 44 in total

View Taxonomy