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DolZOral124_scaffold_542

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_542_1
unknown

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comp(402..1064)
-----------------
DNA (663bp)
protein (221aa)

This feature has no annotations

DolZOral124_scaffold_542_2
unknown

Not on your lists

comp(1057..1368)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

DolZOral124_scaffold_542_3
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1671..4121
-----------------
DNA (2451bp)
protein (817aa)
Uncharacterized protein n=1 Tax=Treponema denticola SP32 RepID=S3LF63_TREDN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMB22318.1}; TaxID=999437 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola SP33.;"
DolZOral124_scaffold_542_4
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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4316..5281
-----------------
DNA (966bp)
protein (322aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2BK18_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EMB22319.1}; TaxID=999437 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola SP33.;"
hypothetical protein
DolZOral124_scaffold_542_5
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5281..6858
-----------------
DNA (1578bp)
protein (526aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2AYY5_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EMB22320.1}; TaxID=999437 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola SP33.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component
DolZOral124_scaffold_542_6
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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6858..8978
-----------------
DNA (2121bp)
protein (707aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=2 Tax=Treponema denticola RepID=M2AGH5_TREDN
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EMB22321.1}; TaxID=999437 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
DolZOral124_scaffold_542_7
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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8971..9990
-----------------
DNA (1020bp)
protein (340aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2BBD3_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EMB22322.1}; TaxID=999437 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola SP33.;"
ABC transporter ATPase
DolZOral124_scaffold_542_8
unknown

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9977..10429
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

DolZOral124_scaffold_542_9
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10722..12413
-----------------
DNA (1692bp)
protein (564aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9X9S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL20171.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
putative sensory box/ggdef family protein
DolZOral124_scaffold_542_10
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12644..13312
-----------------
DNA (669bp)
protein (223aa)
sdhB; L-serine dehydratase subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Oribacterium sp. oral taxon 108 str. F0425 RepID=F5T6H9_9FIRM
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EHL09832.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source=
DolZOral124_scaffold_542_11
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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13314..14195
-----------------
DNA (882bp)
protein (294aa)
sdhA; L-serine dehydratase subunit alpha (EC:4.3.1.17)
L-serine dehydratase alpha subunit SdhA {ECO:0000313|EMBL:ADL34451.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ADL34451.1};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiracea
serine dehydratase subunit alpha n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B4B095
DolZOral124_scaffold_542_12
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14270..15628
-----------------
DNA (1359bp)
protein (453aa)
Multi antimicrobial extrusion protein (Na(+)/drug antiporter) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CS78_9CLOT
Multi antimicrobial extrusion protein (Na(+)/drug antiporter) {ECO:0000313|EMBL:EOD01496.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;
putative efflux protein, MATE family
DolZOral124_scaffold_542_13
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15786..17066
-----------------
DNA (1281bp)
protein (427aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C5A5_ACAM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW26345.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 1
DolZOral124_scaffold_542_14
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17174..17632
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWP4_TEPAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCP25533.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaer
DolZOral124_scaffold_542_15
unknown

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18043..18498
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

DolZOral124_scaffold_542_16
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18549..20384)
-----------------
DNA (1836bp)
protein (612aa)
hypothetical protein n=1 Tax=Streptococcus ferus RepID=UPI00037A98E2
Uncharacterized protein {ECO:0000313|EMBL:EGG92107.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
glycerophosphoryl diester phosphodiesterasefamily protein
DolZOral124_scaffold_542_17
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20561..21733
-----------------
DNA (1173bp)
protein (391aa)
virion core protein (lumpy skin disease virus) n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E2F2
putative virion core protein (lumpy skin disease virus)
Putative virion core protein (Lumpy skin disease virus) {ECO:0000313|EMBL:AEV70262.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sour
DolZOral124_scaffold_542_18
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21763..22851
-----------------
DNA (1089bp)
protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5ED71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX86752.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
DolZOral124_scaffold_542_19
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22964..23455
-----------------
DNA (492bp)
protein (164aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAM
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
tRNA methyltransferase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B3C226
DolZOral124_scaffold_542_20
unknown

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23462..23848
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

DolZOral124_scaffold_542_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23881..24165
-----------------
DNA (285bp)
protein (95aa)
Putative septation protein SpoVG n=1 Tax=Clostridium sp. CAG:7 RepID=R5J327_9CLOT
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source
Uncharacterized protein, involved in the regulation of septum location
DolZOral124_scaffold_542_22
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

24637..25959
-----------------
DNA (1323bp)
protein (441aa)
Putative sugar-binding secreted protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HC75_9FIRM rbh
Putative sugar-binding secreted protein {ECO:0000313|EMBL:CCY22462.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
DolZOral124_scaffold_542_23
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

26056..27438
-----------------
DNA (1383bp)
protein (461aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Sugar ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCL1_9FIRM
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCY22461.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
DolZOral124_scaffold_542_24
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

27435..28301
-----------------
DNA (867bp)
protein (289aa)
Sugar ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYL5_9FIRM
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCY22460.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
maltose/maltodextrin transport system permease
DolZOral124_scaffold_542_25
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28448..28606
-----------------
DNA (159bp)
protein (53aa)
Rubredoxin n=1 Tax=Clostridium sp. BL8 RepID=T0N3C7_9CLOT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
rubredoxin
DolZOral124_scaffold_542_26
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28780..30447)
-----------------
DNA (1668bp)
protein (556aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9X9S5_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EJU19557.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae
diguanylate cyclase (ggdef) domain protein
DolZOral124_scaffold_542_27
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30618..32144)
-----------------
DNA (1527bp)
protein (509aa)
Carbohydrate kinase, fggy n=1 Tax=Thermosipho africanus (strain TCF52B) RepID=B7ICK6_THEAB
Carbohydrate kinase {ECO:0000313|EMBL:KEZ86832.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
carbohydrate kinase, fggy
DolZOral124_scaffold_542_28
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32574..33404
-----------------
DNA (831bp)
protein (277aa)
Putative Transglutaminase-like enzyme, cysteine protease n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PX22_CLOSD
putative Transglutaminase-like enzyme, cysteine protease
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_542_29
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33604..34224
-----------------
DNA (621bp)
protein (207aa)
Shikimate kinase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JGU6_9CLOT
shikimate kinase
Shikimate kinase {ECO:0000313|EMBL:AEY64529.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
DolZOral124_scaffold_542_30
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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34226..35575
-----------------
DNA (1350bp)
protein (450aa)
Amino acid permease family protein n=4 Tax=Aeromonas veronii RepID=F4D805_AERVB
amino acid permease family protein
Uncharacterized protein {ECO:0000313|EMBL:EKB23160.1}; TaxID=1073385 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas veronii AMC35
Displaying items 1-30 of 43 in total

View Taxonomy