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DolZOral124_scaffold_556

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_556_1
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(231..1922)
-----------------
DNA (1692bp)
protein (564aa)
ABC transporter ATPase n=1 Tax=Ruegeria conchae RepID=UPI000237A646 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGL00796.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Th
ABC transporter-like protein
DolZOral124_scaffold_556_2
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1919..2857)
-----------------
DNA (939bp)
protein (313aa)
UPI0003D1C3B5 related cluster n=1 Tax=unknown RepID=UPI0003D1C3B5 rbh
Contig17, whole genome shotgun sequence {ECO:0000313|EMBL:ETA51185.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
binding-protein-dependent transport system inner membrane protein
DolZOral124_scaffold_556_3
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2854..3825)
-----------------
DNA (972bp)
protein (324aa)
Peptide transport permease protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZE37_ROSLO rbh
ABC transporter permease {ECO:0000313|EMBL:KGL00794.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacte
peptide transport permease rbh
DolZOral124_scaffold_556_4
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3979..5559)
-----------------
DNA (1581bp)
protein (527aa)
Extracellular solute-binding protein, putative n=1 Tax=Roseobacter sp. CCS2 RepID=A4EJB2_9RHOB rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC50422.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;"
extracellular solute-binding protein
DolZOral124_scaffold_556_5
Photobacterium leiognathi, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5791..6570)
-----------------
DNA (780bp)
protein (260aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1001530 spec
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003718FDC
hmuV; hemin importer ATP-binding subunit
DolZOral124_scaffold_556_6
Candidatus Synechococcus spongiarum, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6567..7595)
-----------------
DNA (1029bp)
protein (343aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00035F29C3
Uncharacterized protein {ECO:0000313|EMBL:KKZ12785.1}; TaxID=1604020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Candidatus Synechococcus spongiaru
iron-siderophores/B12/hemin ABC transporter permease protein
DolZOral124_scaffold_556_7
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7607..8449)
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003676795
Hemin ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW60596.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" s
periplasmic binding protein
DolZOral124_scaffold_556_8
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8638..9642
-----------------
DNA (1005bp)
protein (335aa)
Hemin transport/degradation protein HmuS n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RCD1_9RHOB rbh
hmuS; hemin transport/degradation protein HmuS
Hemin transport/degradation protein HmuS {ECO:0000313|EMBL:AGI69847.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source
DolZOral124_scaffold_556_9
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9910..11631
-----------------
DNA (1722bp)
protein (574aa)
Glycosyl transferase, group 1 {ECO:0000313|EMBL:AEV39014.1}; EC=2.4.-.- {ECO:0000313|EMBL:AEV39014.1};; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte
Glycosyl transferase, group 1 n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PHE4_PSEUV
group 1 glycosyl transferase
DolZOral124_scaffold_556_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11775..12446)
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZB75_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS88498.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
DolZOral124_scaffold_556_11
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12531..14117)
-----------------
DNA (1587bp)
protein (529aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000378AEB0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV39011.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp.
DolZOral124_scaffold_556_12
unknown

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14328..14651
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

DolZOral124_scaffold_556_13
unknown

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14655..15158
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

DolZOral124_scaffold_556_14
unknown

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15466..15600
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

DolZOral124_scaffold_556_15
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15593..17266)
-----------------
DNA (1674bp)
protein (558aa)
serralysin (EC:3.4.24.-)
Neutral zinc metallopeptidase (Fragment) n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F1J7_9RHOB
Neutral zinc metallopeptidase {ECO:0000313|EMBL:EBA14291.1}; Flags: Fragment;; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" so
DolZOral124_scaffold_556_16
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18320..19861)
-----------------
DNA (1542bp)
protein (514aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VIH8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ11909.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
DolZOral124_scaffold_556_17
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20122..21192
-----------------
DNA (1071bp)
protein (357aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VIH6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ11907.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
DolZOral124_scaffold_556_18
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21386..22078)
-----------------
DNA (693bp)
protein (231aa)
Mobile element protein {ECO:0000313|EMBL:EPX78515.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter ar
DolZOral124_scaffold_556_19
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22406..22747
-----------------
DNA (342bp)
protein (114aa)
Transposase, IS5 family n=1 Tax=uncultured marine bacterium 582 RepID=Q6SEV8_9BACT
Transposase {ECO:0000313|EMBL:KGM86487.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069
transposase IS4 family protein
DolZOral124_scaffold_556_trna_1
unknown

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comp(22882..22955)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_556_20
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23005..24057)
-----------------
DNA (1053bp)
protein (351aa)
Transcriptional regulator, LacI family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VMJ6_9RHOB
Transcriptional regulator, LacI family protein {ECO:0000313|EMBL:EAQ10498.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;"
LacI family transcription regulator
DolZOral124_scaffold_556_21
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24154..24903)
-----------------
DNA (750bp)
protein (250aa)
Inositol monophosphatase family protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CU69_9RHOB
Inositol monophosphatase family protein {ECO:0000313|EMBL:EEX09392.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silic
inositol monophosphatase family protein
DolZOral124_scaffold_556_22
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24920..26266)
-----------------
DNA (1347bp)
protein (449aa)
Putative PmbA/TldD protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VHE0_9RHOB
Putative PmbA/TldD protein {ECO:0000313|EMBL:EAQ12695.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibact
pmbA; peptidase U62 modulator of DNA gyrase
DolZOral124_scaffold_556_23
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26375..27112
-----------------
DNA (738bp)
protein (246aa)
20-beta-hydroxysteroid dehydrogenase, putative n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VHD9_9RHOB
20-beta-hydroxysteroid dehydrogenase, putative {ECO:0000313|EMBL:EAQ12694.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;"
dehydrogenase
DolZOral124_scaffold_556_24
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27105..27716
-----------------
DNA (612bp)
protein (204aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VHD8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO54315.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
enoyl-CoA hydratase/isomerase
DolZOral124_scaffold_556_25
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27730..29037
-----------------
DNA (1308bp)
protein (436aa)
Mechanosensitive ion channel family protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16E01_ROSDO
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:KCV82272.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" sou
mechanosensitive ion channel family protein
DolZOral124_scaffold_556_26
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29034..30209
-----------------
DNA (1176bp)
protein (392aa)
hypothetical protein n=1 Tax=Loktanella hongkongensis RepID=UPI0003693A7C rbh
NAD(FAD)-utilizing dehydrogenases {ECO:0000313|EMBL:GAD56515.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanel
NAD(FAD)-utilizing dehydrogenase
DolZOral124_scaffold_556_27
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30176..30772)
-----------------
DNA (597bp)
protein (199aa)
Glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VHD3_9RHOB
Glutathione S-transferase family protein {ECO:0000313|EMBL:EAQ12688.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source
DolZOral124_scaffold_556_28
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30824..31852)
-----------------
DNA (1029bp)
protein (343aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SI97_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP77078.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
hypothetical protein
DolZOral124_scaffold_556_29
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(31856..34402)
-----------------
DNA (2547bp)
protein (849aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=314271 species="Bacteria; Proteob
leuS; leucyl-tRNA synthetase (EC:6.1.1.-)
Leucine--tRNA ligase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VMK9_9RHOB rbh
Displaying items 1-30 of 56 in total

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