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DolZOral124_scaffold_559

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_559_1
Mycoplasma ovipneumoniae, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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3..578
-----------------
DNA (576bp)
protein (192aa)
Type II restriction modification system cytosine-5 DNA methyltransferase and endonuclease fusion protein n=1 Tax=Mycoplasma bovigenitalium 51080 RepID=N9VF65_9MOLU
Type II restriction modification system endonuclease {ECO:0000313|EMBL:EXU61447.1}; TaxID=1188239 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma ovipneu
type II R-M system restriction endonuclease
DolZOral124_scaffold_559_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

764..1600
-----------------
DNA (837bp)
protein (279aa)
yrrM; O-methyltransferase YrrM (EC:2.1.1.-)
O-methyltransferase YrrM n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B084_CLOA9
Methyltransferase {ECO:0000313|EMBL:KGG81461.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214
DolZOral124_scaffold_559_3
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1604..2860
-----------------
DNA (1257bp)
protein (419aa)
Peptidase, U32 family {ECO:0000313|EMBL:KDR94144.1}; EC=3.4.-.- {ECO:0000313|EMBL:KDR94144.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
Peptidase, U32 family n=1 Tax=Clostridium termitidis CT1112 RepID=S0FP98_9CLOT
peptidase U32
DolZOral124_scaffold_559_4
Methanococcus aeolicus, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

2876..3784
-----------------
DNA (909bp)
protein (303aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=419665 species="Archaea; Euryar
hypothetical protein n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B73237
DolZOral124_scaffold_559_5
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3821..5509
-----------------
DNA (1689bp)
protein (563aa)
Type IV fimbrial assembly, ATPase PilB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASI6_9CLOT
Type IV fimbrial assembly, ATPase PilB {ECO:0000313|EMBL:EOD00113.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisaliniba
GspE; pili biogenesis protein PilB-like ATPase
DolZOral124_scaffold_559_6
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5541..6593
-----------------
DNA (1053bp)
protein (351aa)
Predicted ATPases involved in pili biogenesis, PilT homologs n=3 Tax=Caldanaerobacter subterraneus RepID=Q8RAG0_THETN
Twitching motility protein PilT {ECO:0000313|EMBL:KJF28120.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
pili biogenesis protein PilT-like ATPase
DolZOral124_scaffold_559_7
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6606..7820
-----------------
DNA (1215bp)
protein (405aa)
Type IV fimbrial assembly protein PilC n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CN31_9CLOT
Type 4 fimbrial assembly protein PilC {ECO:0000313|EMBL:KDR93811.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostri
xpsF; general secretion pathway protein F
DolZOral124_scaffold_559_8
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8150..8611
-----------------
DNA (462bp)
protein (154aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RAF8_THETN
Uncharacterized protein {ECO:0000313|EMBL:KGG81449.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
hypothetical protein
DolZOral124_scaffold_559_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8622..9146
-----------------
DNA (525bp)
protein (175aa)
Putative type IV pilin n=3 Tax=Clostridium perfringens RepID=H7CYY8_CLOPF
type IV pilin
Putative type IV pilin {ECO:0000313|EMBL:EIA16054.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
DolZOral124_scaffold_559_10
Leptotrichia wadei, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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9315..9599
-----------------
DNA (285bp)
protein (95aa)
virulence factor n=1 Tax=Leptotrichia shahii RepID=UPI0003639473
Virulence-associated protein D region {ECO:0000313|EMBL:ERK48760.1}; TaxID=888055 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia wadei F0279.;
virulence-associated protein D (VapD) conserved region
DolZOral124_scaffold_559_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9612..10103
-----------------
DNA (492bp)
protein (164aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF06_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT27426.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st
Pilus biogenesis protein tapA
DolZOral124_scaffold_559_12
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10155..10907
-----------------
DNA (753bp)
protein (251aa)
hofD; prepilin-like proteins leader peptide-processing enzyme, type 4 (EC:3.4.23.43 2.1.1.-)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003653069
Uncharacterized protein {ECO:0000313|EMBL:KJF26936.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
DolZOral124_scaffold_559_13
unknown

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10928..11506
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

DolZOral124_scaffold_559_14
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11487..12680
-----------------
DNA (1194bp)
protein (398aa)
Probable fimbrial assembly protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XI38_CLOPE
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KDR93816.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridi
type IV pilus assembly protein PilM
DolZOral124_scaffold_559_15
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12677..13345
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:KDR93817.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
DolZOral124_scaffold_559_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13332..14705
-----------------
DNA (1374bp)
protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q448_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22362.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
DolZOral124_scaffold_559_17
unknown

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14725..15918
-----------------
DNA (1194bp)
protein (398aa)

This feature has no annotations

DolZOral124_scaffold_559_18
unknown

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15923..19099
-----------------
DNA (3177bp)
protein (1059aa)

This feature has no annotations

DolZOral124_scaffold_559_19
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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19099..19668
-----------------
DNA (570bp)
protein (190aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=404380 species="Bacteria; Proteobacteria; Deltapr
Shikimate kinase n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E8I8_GEOBB
aroK-1; shikimate kinase
DolZOral124_scaffold_559_20
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19749..20213
-----------------
DNA (465bp)
protein (155aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TJL4_CALOO
DolZOral124_scaffold_559_21
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20230..20787
-----------------
DNA (558bp)
protein (186aa)
Elongation factor P n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=EFP_ALKOO
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
elongation factor P
DolZOral124_scaffold_559_22
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20864..21268
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GFW3_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO38447.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612
DolZOral124_scaffold_559_23
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21338..21889
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RL63_HALHG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ14827.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniforman
DolZOral124_scaffold_559_24
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21894..22295
-----------------
DNA (402bp)
protein (134aa)
N utilization substance protein B homolog n=3 Tax=Finegoldia magna RepID=NUSB_FINM2
transcription terminator
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiale
DolZOral124_scaffold_559_25
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22353..23507
-----------------
DNA (1155bp)
protein (385aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000255|HAMAP-Rule:MF_00378}; EC=3.1.11.6 {ECO:0000255|HAMAP-Rule:MF_00378};; Exodeoxyribonuclease VII large subunit {ECO:0000255|HAMAP-Rule:MF_00378}; Short=
Exodeoxyribonuclease 7 large subunit n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=EX7L_ALKOO
DolZOral124_scaffold_559_26
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23504..23689
-----------------
DNA (186bp)
protein (62aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
DolZOral124_scaffold_559_27
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23693..24634
-----------------
DNA (942bp)
protein (314aa)
geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZ43_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:EEA85213.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis D
DolZOral124_scaffold_559_28
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24649..25098
-----------------
DNA (450bp)
protein (150aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRG0_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH21464.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
DolZOral124_scaffold_559_29
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25681..26259
-----------------
DNA (579bp)
protein (193aa)
Membrane spanning protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CYR4_9CLOT
Membrane spanning protein {ECO:0000313|EMBL:EOD01724.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritima
membrane spanning protein
DolZOral124_scaffold_559_30
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26302..28206
-----------------
DNA (1905bp)
protein (635aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RSH0_9CLOT rbh
Displaying items 1-30 of 61 in total

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