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DolZOral124_scaffold_562

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_562_1
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..733
-----------------
DNA (732bp)
protein (244aa)
RNA pseudouridine synthase (EC:5.4.99.-)
RNA pseudouridine synthase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TP01_9PORP
Pseudouridine synthase {ECO:0000313|EMBL:KGN82331.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290
DolZOral124_scaffold_562_2
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(836..1285)
-----------------
DNA (450bp)
protein (150aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyr
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2KEE5_9PORP
cytidine/deoxycytidylate deaminase
DolZOral124_scaffold_562_3
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1298..1501)
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized protein n=1 Tax=Porphyromonas gingivalis F0570 RepID=U2HWR8_PORGN
Uncharacterized protein {ECO:0000313|EMBL:KGN67155.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-23
hypothetical protein
DolZOral124_scaffold_562_4
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1516..2880)
-----------------
DNA (1365bp)
protein (455aa)
YihY family protein n=1 Tax=Porphyromonas gingivalis F0185 RepID=U2JJ61_PORGN
Ribonuclease BN {ECO:0000313|EMBL:KGN83726.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.
ribonuclease BN
DolZOral124_scaffold_562_5
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3343..4452)
-----------------
DNA (1110bp)
protein (370aa)
ATP-binding protein, Mrp/Nbp35 family n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NGA3_9PORP
Sodium:proton antiporter {ECO:0000313|EMBL:KGN82270.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-2
ATP-binding protein Mrp/Nbp35 family
DolZOral124_scaffold_562_6
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4468..5226)
-----------------
DNA (759bp)
protein (253aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IYV3_9PORP
trmB; tRNA (guanine-N(7)-)-methyltransferase
DolZOral124_scaffold_562_7
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5233..5562)
-----------------
DNA (330bp)
protein (110aa)
Uncharacterized protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NH55_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN82268.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_562_8
unknown

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comp(5707..5955)
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

DolZOral124_scaffold_562_9
unknown

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comp(5987..6232)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

DolZOral124_scaffold_562_10
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6281..9025)
-----------------
DNA (2745bp)
protein (915aa)
transglutaminase n=1 Tax=Bacteroides gallinarum RepID=UPI000375DE3C
Uncharacterized protein {ECO:0000313|EMBL:CCX62833.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
transglutaminase
DolZOral124_scaffold_562_11
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9040..10431)
-----------------
DNA (1392bp)
protein (464aa)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CYR9_9BACE rbh
Glycoside hydrolase family 29 (Alpha-L-fucosidase) {ECO:0000313|EMBL:CDA76751.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental
alpha-L-fucosidase
DolZOral124_scaffold_562_12
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10615..10875)
-----------------
DNA (261bp)
protein (87aa)
Putative DNA-binding protein HU n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NGU6_9PORP
DNA-binding protein {ECO:0000313|EMBL:KGN81861.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH
hup-1; DNA-binding protein HU
DolZOral124_scaffold_562_13
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11102..12580)
-----------------
DNA (1479bp)
protein (493aa)
Glutamate synthase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IPC5_9PORP
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:KGN86497.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp
2-polyprenylphenol hydroxylase
DolZOral124_scaffold_562_14
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12985..14235)
-----------------
DNA (1251bp)
protein (417aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5W5T1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGN82726.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
hypothetical protein
DolZOral124_scaffold_562_15
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14341..17649)
-----------------
DNA (3309bp)
protein (1103aa)
Protein translocase subunit SecA n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K678_9PORP
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porph
secA; preprotein translocase subunit SecA
DolZOral124_scaffold_562_16
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17715..19256)
-----------------
DNA (1542bp)
protein (514aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VT27_9PORP
Nucleotide pyrophosphatase {ECO:0000313|EMBL:KGN81936.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT
hypothetical protein
DolZOral124_scaffold_562_17
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19279..20655)
-----------------
DNA (1377bp)
protein (459aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI0003640CC8
Uncharacterized protein {ECO:0000313|EMBL:KGN70137.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-23
hypothetical protein
DolZOral124_scaffold_562_18
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20691..21527)
-----------------
DNA (837bp)
protein (279aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromo
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00035ECD90
peptidyl-prolyl cis-trans isomerase, FKBP-type
DolZOral124_scaffold_562_19
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21569..22363)
-----------------
DNA (795bp)
protein (265aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromo
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Porphyromonas RepID=S4NM41_9PORP
fkpA; peptidyl-prolyl cis-trans isomerase FkpA
DolZOral124_scaffold_562_20
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22386..22970)
-----------------
DNA (585bp)
protein (195aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromo
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VRD6_9PORP rbh
FKBP-type peptidylprolyl isomerase
DolZOral124_scaffold_562_21
unknown

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comp(23154..25076)
-----------------
DNA (1923bp)
protein (641aa)

This feature has no annotations

DolZOral124_scaffold_562_22
unknown

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comp(25097..25267)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

DolZOral124_scaffold_562_23
unknown

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25577..25786
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

DolZOral124_scaffold_562_24
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25808..28459
-----------------
DNA (2652bp)
protein (884aa)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2J099_9PORP
DNA topoisomerase IV subunit A {ECO:0000313|EMBL:KGN86052.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp.
DNA topoisomerase IV subunit A
DolZOral124_scaffold_562_25
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28431..29384
-----------------
DNA (954bp)
protein (318aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IH10_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN86053.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_562_26
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29375..30457
-----------------
DNA (1083bp)
protein (361aa)
Peptidase, S41 family n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JAA1_9PORP
Peptidase S41 {ECO:0000313|EMBL:KGN86054.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
hypothetical protein
DolZOral124_scaffold_562_trna_1
unknown

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30612..30683
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_562_trna_2
unknown

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30879..30952
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_562_27
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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30929..32491
-----------------
DNA (1563bp)
protein (521aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6H2P5_9PORP
murC; UDP-N-acetylmuramate--L-alanine ligase
DolZOral124_scaffold_562_28
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32504..33334
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K7U8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN86089.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
cell division protein FtsQ
Displaying items 1-30 of 48 in total

View Taxonomy