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DolZOral124_scaffold_577

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_577_1
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

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2..1597
-----------------
DNA (1596bp)
protein (532aa)
Uncharacterized protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9REE9_9CYAN
hypothetical protein Tax=CG_Mariprof_04
hypothetical protein
DolZOral124_scaffold_577_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1632..2735
-----------------
DNA (1104bp)
protein (368aa)
Tetratricopeptide repeat domain protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08Z71_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFA92296.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
DolZOral124_scaffold_577_3
unknown

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2748..3629
-----------------
DNA (882bp)
protein (294aa)

This feature has no annotations

DolZOral124_scaffold_577_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4038..4988)
-----------------
DNA (951bp)
protein (317aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000373FB75 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ35142.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
membrane protein
DolZOral124_scaffold_577_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5481..6065
-----------------
DNA (585bp)
protein (195aa)
pilus modification protein PilV n=1 Tax=Leucothrix mucor RepID=UPI0003B498C6
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EIJ33729.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothri
Type IV fimbrial biogenesis protein PilV
DolZOral124_scaffold_577_6
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6062..6883
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000377E1C5
Uncharacterized protein {ECO:0000313|EMBL:KHL71218.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
putative Tfp pilus assembly protein PilW
DolZOral124_scaffold_577_7
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6885..7373
-----------------
DNA (489bp)
protein (163aa)
Tfp pilus assembly protein PilX; K02673 type IV pilus assembly protein PilX Tax=RBG_16_Gammaproteobacteria_57_12_curated
DolZOral124_scaffold_577_8
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7429..10890
-----------------
DNA (3462bp)
protein (1154aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B6567D
Tfp pilus assembly protein tip-associated adhesin PilY1-like; K02674 type IV pilus assembly protein PilY1 Tax=RBG_16_Gammaproteobacteria_57_12_curated
hypothetical protein
DolZOral124_scaffold_577_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10908..11399
-----------------
DNA (492bp)
protein (164aa)
methylation site containing protein n=1 Tax=Leucothrix mucor RepID=UPI0003B50885
Pilus assembly protein {ECO:0000313|EMBL:EIJ33726.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.
fimbrial protein pilin
DolZOral124_scaffold_577_10
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11478..12326)
-----------------
DNA (849bp)
protein (283aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B357DC
protein-(glutamine-N5) methyltransferase
DolZOral124_scaffold_577_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12381..13466)
-----------------
DNA (1086bp)
protein (362aa)
peptide chain release factor 1 n=1 Tax=Leucothrix mucor RepID=UPI0003B76CA8
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thi
peptide chain release factor 1
DolZOral124_scaffold_577_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13463..14773)
-----------------
DNA (1311bp)
protein (437aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQS9_9GAMM
glutamyl-tRNA reductase
DolZOral124_scaffold_577_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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15166..17103
-----------------
DNA (1938bp)
protein (646aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B77C54
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:EIJ33721.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae;
TPR repeat-containing protein
DolZOral124_scaffold_577_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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17260..17913
-----------------
DNA (654bp)
protein (218aa)
Outer-membrane lipoprotein LolB n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQS7_9GAMM
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
outer membrane lipoprotein LolB
DolZOral124_scaffold_577_15

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17923..18816
-----------------
DNA (894bp)
protein (298aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036CAE0A
Uncharacterized protein {ECO:0000313|EMBL:KKL26079.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DolZOral124_scaffold_577_trna_1
unknown

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18842..18913
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_577_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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19008..19979
-----------------
DNA (972bp)
protein (324aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Leucothrix mucor RepID=UPI0003B48F1A
DolZOral124_scaffold_577_17
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

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20034..20789
-----------------
DNA (756bp)
protein (252aa)
50S ribosomal protein L25 n=1 Tax=Leucothrix mucor RepID=UPI0003B70783
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=391615 sp
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
DolZOral124_scaffold_577_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20812..21390
-----------------
DNA (579bp)
protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Aminoacyl-tRNA hydrolase (EC:3.1.1.29)
peptidyl-tRNA hydrolase n=1 Tax=Leucothrix mucor RepID=UPI0003B43DCA
DolZOral124_scaffold_577_19
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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21492..22583
-----------------
DNA (1092bp)
protein (364aa)
GTP-binding protein YchF n=1 Tax=Leucothrix mucor RepID=UPI0003B68DF6
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source=
ychF; GTP-binding protein
DolZOral124_scaffold_577_20
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22898..23539
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein n=2 Tax=Rhizobium RepID=U4Q3I5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAK70536.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
conserved membrane protein of unknown function
DolZOral124_scaffold_577_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24056..24895)
-----------------
DNA (840bp)
protein (280aa)
Peptidase M23 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYU9_9GAMM
Peptidase M23 {ECO:0000313|EMBL:EIJ36542.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
peptidase M23B
DolZOral124_scaffold_577_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25396..26436
-----------------
DNA (1041bp)
protein (347aa)
RNA polymerase sigma factor RpoS n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYV6_9GAMM
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=870187 species="Bacteria; Proteobacteri
RNA polymerase sigma factor
DolZOral124_scaffold_577_23
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26513..28129)
-----------------
DNA (1617bp)
protein (539aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; T
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Leucothrix mucor RepID=UPI0003B4088D
DolZOral124_scaffold_577_24
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28396..28977
-----------------
DNA (582bp)
protein (194aa)
RNA polymerase sigma factor AlgU n=1 Tax=Leucothrix mucor RepID=UPI0003B64133
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS
RNA polymerase sigma factor RpoE
DolZOral124_scaffold_577_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29138..29833
-----------------
DNA (696bp)
protein (232aa)
Anti sigma-E protein RseA family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPI0_9GAMM
Anti sigma-E protein RseA family protein {ECO:0000313|EMBL:EIJ33273.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix
DolZOral124_scaffold_577_26
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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29908..30885
-----------------
DNA (978bp)
protein (326aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000379253E
Sigma E regulatory protein, MucB/RseB {ECO:0000313|EMBL:EIJ33272.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;"
sigma-E factor regulatory protein
DolZOral124_scaffold_577_27
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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30900..31346
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B65F77
positive regulator of sigma E, RseC/MucC type Tax=RifOxyA12_full_Desulfobacula_46_16_curated
DolZOral124_scaffold_577_28
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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31534..32901
-----------------
DNA (1368bp)
protein (456aa)
Putative periplasmic serine endoprotease DegP-like {ECO:0000313|EMBL:ESS72360.1}; EC=3.4.21.107 {ECO:0000313|EMBL:ESS72360.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Me
protease Do (EC:3.4.21.108)
serine peptidase n=1 Tax=Leucothrix mucor RepID=UPI0003B5C401
DolZOral124_scaffold_577_29
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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33000..33266
-----------------
DNA (267bp)
protein (89aa)
glutaredoxin n=1 Tax=Leucothrix mucor RepID=UPI0003B69161
NrdH-redoxin (NrdH) family {ECO:0000313|EMBL:KFZ91155.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
glutaredoxin
Displaying items 1-30 of 54 in total

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