ggKbase home page

DolZOral124_scaffold_602

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_602_1
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..929)
-----------------
DNA (927bp)
protein (309aa)
RNAse E; K08300 ribonuclease E [EC:3.1.26.12] Tax=GWB2_Desulfobacterales_56_26_curated
Probable RNAse E id=2297273 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
ribonuclease, Rne/Rng family
DolZOral124_scaffold_602_2
Bacillus wakoensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1236..2201
-----------------
DNA (966bp)
protein (322aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1236970 species="Bacteria; Firmicutes;
lactate dehydrogenase n=1 Tax=Staphylococcus massiliensis RepID=UPI000314CC2B
ldh-2; lactate dehydrogenase
DolZOral124_scaffold_602_3
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2576..3037
-----------------
DNA (462bp)
protein (154aa)
Protein MraZ n=1 Tax=uncultured bacterium RepID=K1Z791_9BACT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae
MraZ protein
DolZOral124_scaffold_602_4

Not on your lists

3034..3924
-----------------
DNA (891bp)
protein (297aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=uncultured bacterium RepID=K1ZRT0_9BACT
hypothetical protein
DolZOral124_scaffold_602_5
unknown

Not on your lists

3949..4389
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

DolZOral124_scaffold_602_6
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4403..6295
-----------------
DNA (1893bp)
protein (631aa)
Related to sporulation specific penicillin-binding protein id=1829510 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
cell division protein FtsI/penicillin-binding protein 2 Tax=GWB2_Desulfobacterales_56_26_curated
cell division protein FtsI/penicillin-binding protein 2
DolZOral124_scaffold_602_7
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6310..9315
-----------------
DNA (3006bp)
protein (1002aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteoba
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=1829506 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase
DolZOral124_scaffold_602_8

Not on your lists

9331..10410
-----------------
DNA (1080bp)
protein (360aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=uncultured bacterium RepID=K1Y386_9BACT
phospho-N-acetylmuramoyl-pentapeptide-transferase
DolZOral124_scaffold_602_9
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10407..11786
-----------------
DNA (1380bp)
protein (460aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|RuleBase:RU003664}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|RuleBase:RU003664};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=1829499 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
UDP-N-acetylmuramoylalanine-D-glutamate ligase
DolZOral124_scaffold_602_10
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11783..12901
-----------------
DNA (1119bp)
protein (373aa)
peptidoglycan synthesis protein (MurG); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] Tax=GWB2_Desulfobacter
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=1829494 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
peptidoglycan synthesis protein (MurG)
DolZOral124_scaffold_602_11
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12894..14285
-----------------
DNA (1392bp)
protein (464aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=MURC_DESPS
UDP-N-acetylmuramate-alanine ligase
DolZOral124_scaffold_602_12
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14272..15210
-----------------
DNA (939bp)
protein (313aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase id=1829486 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
UDP-N-acetylenolpyruvoylglucosamine reductase (MurB)
DolZOral124_scaffold_602_13
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15255..16250
-----------------
DNA (996bp)
protein (332aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YRB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJR97294.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
cell division septal protein
DolZOral124_scaffold_602_14
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16286..17563
-----------------
DNA (1278bp)
protein (426aa)
Cell division protein ftsA id=1829482 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacter
cell division protein FtsA
DolZOral124_scaffold_602_15
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17717..18940
-----------------
DNA (1224bp)
protein (408aa)
Cell division protein FtsZ id=1829480 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
cell division protein FtsZ Tax=GWB2_Desulfobacterales_56_26_curated
cell division protein FtsZ
DolZOral124_scaffold_602_16

Not on your lists

19039..20490
-----------------
DNA (1452bp)
protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YFP8_9BACT
signal transduction histidine kinase
DolZOral124_scaffold_602_17
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20599..22323
-----------------
DNA (1725bp)
protein (575aa)
NADH oxidase; K00359 NADH oxidase [EC:1.6.-.-] Tax=GWB2_Desulfobacterales_56_26_curated
Related to NADH oxidase id=1829476 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
NAD(FAD)-dependent dehydrogenase
DolZOral124_scaffold_602_18
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22419..23402)
-----------------
DNA (984bp)
protein (328aa)
Probable cobalt chelatase, chain A n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ART4_DESPS rbh
cobalt chelatase, chain A
Probable cobalt chelatase, chain A {ECO:0000313|EMBL:CAG34941.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desu
DolZOral124_scaffold_602_19
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24004..24489
-----------------
DNA (486bp)
protein (162aa)
xanthine-guanine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01903}; EC=2.4.2.22 {ECO:0000255|HAMAP-Rule:MF_01903};; Xanthine-guanine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01903}; Shor
Xanthine phosphoribosyltransferase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=XGPT_DESPS
DolZOral124_scaffold_602_20
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24489..25994
-----------------
DNA (1506bp)
protein (502aa)
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS02263.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;
Probable sugar ABC transporter, ATP-binding protein id=2165749 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
sugar ABC transporter ATP-binding protein
DolZOral124_scaffold_602_21
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26010..26702
-----------------
DNA (693bp)
protein (231aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B68228
phosphoglycerate mutase Tax=RifOxyA12_full_Desulfobacula_46_16_curated
hypothetical protein
DolZOral124_scaffold_602_22
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26690..27130)
-----------------
DNA (441bp)
protein (147aa)
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" sou
nickel-responsive regulator
Putative nickel-responsive regulator id=3566636 bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
DolZOral124_scaffold_602_23
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27178..28491)
-----------------
DNA (1314bp)
protein (438aa)
Radical SAM protein {ECO:0000313|EMBL:KJR97124.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c
Putative uncharacterized protein id=2031476 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_602_24
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28488..28913)
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR97125.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
Putative uncharacterized protein id=2031472 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolZOral124_scaffold_602_25
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29232..29756
-----------------
DNA (525bp)
protein (175aa)
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:KJR97126.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbacea
Peptidoglycan-associated lipoprotein id=2031468 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
peptidoglycan-associated lipoprotein [precursor]
DolZOral124_scaffold_602_26
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29771..30298
-----------------
DNA (528bp)
protein (176aa)
Putative uncharacterized protein id=2031460 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KJR97127.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
outer membrane protein
DolZOral124_scaffold_602_27

Not on your lists

30391..31272
-----------------
DNA (882bp)
protein (294aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YPR0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD34488.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
DolZOral124_scaffold_602_28
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31282..31566
-----------------
DNA (285bp)
protein (95aa)
UPF0296 protein ACD_75C02318G0003 n=1 Tax=uncultured bacterium RepID=K1YAW0_9BACT
UPF0296 protein JT06_00810 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulf
hypothetical protein
DolZOral124_scaffold_602_29

Not on your lists

31566..32180
-----------------
DNA (615bp)
protein (205aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=uncultured bacterium RepID=K1YAU4_9BACT
DolZOral124_scaffold_602_30
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32143..33051
-----------------
DNA (909bp)
protein (303aa)
Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AJ92_DESPS
tRNA methyltransferase {ECO:0000313|EMBL:KJR97325.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BR
tRNA/rRNA methyltransferase
Displaying items 1-30 of 54 in total

View Taxonomy