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DolZOral124_scaffold_608

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_608_1
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..433
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B622E8
Uncharacterized protein {ECO:0000313|EMBL:KFF73732.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
DolZOral124_scaffold_608_2
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(692..1690)
-----------------
DNA (999bp)
protein (333aa)
diphosphomevalonate decarboxylase (EC:4.1.1.33)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00035D5455 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ53844.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
DolZOral124_scaffold_608_3
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1882..2301
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HV26_PSEST
Signal peptide protein {ECO:0000313|EMBL:KJV27244.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
hypothetical protein
DolZOral124_scaffold_608_4
unknown

Not on your lists

2462..2731
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

DolZOral124_scaffold_608_5
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2728..3330
-----------------
DNA (603bp)
protein (201aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051955};; Exoribonuclease T {ECO:0000256|HAMAP-Rul
ribonuclease T (EC:3.1.13.-)
Ribonuclease T n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCK0_9GAMM
DolZOral124_scaffold_608_6
Pseudomonas viridiflava, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3338..4357
-----------------
DNA (1020bp)
protein (340aa)
Lipopolysaccharide heptosyltransferase I n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6AGD4_PSEVI
Strain LMCA8 contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33845.1}; TaxID=33069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
ADP-heptose:LPS heptosyl transferase
DolZOral124_scaffold_608_7
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4579..5292
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0V5_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16428.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
DolZOral124_scaffold_608_8
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5295..5768)
-----------------
DNA (474bp)
protein (158aa)
Putative DNA polymerase III subunit chi {ECO:0000313|EMBL:CDI00940.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDI00940.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacterace
holC; DNA polymerase III subunit chi (EC:2.7.7.7)
DNA polymerase III chi subunit, HolC n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIS6_NEPCE
DolZOral124_scaffold_608_9
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5765..6043)
-----------------
DNA (279bp)
protein (93aa)
UPF0250 protein azo0182 n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1U5_AZOSB
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
DolZOral124_scaffold_608_10
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6196..6855)
-----------------
DNA (660bp)
protein (220aa)
2-phosphoglycolate phosphatase (EC:3.1.3.18)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00036C29A0
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:EUJ10195.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="
DolZOral124_scaffold_608_11
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6887..7720)
-----------------
DNA (834bp)
protein (278aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WXT9_9ALTE
arylsulfatase Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
SH3 type 3 domain-containing protein
DolZOral124_scaffold_608_12
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7845..9881)
-----------------
DNA (2037bp)
protein (679aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00036E8E69
Oligopeptidase A {ECO:0000313|EMBL:KEQ11876.1}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas montipora
oligopeptidase A
DolZOral124_scaffold_608_13
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9948..10640)
-----------------
DNA (693bp)
protein (231aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI0003788628
DolZOral124_scaffold_608_14
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10904..11473
-----------------
DNA (570bp)
protein (190aa)
Translation initiation factor IF-3 n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HT18_9GAMM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="
translation initiation factor IF-3
DolZOral124_scaffold_608_15
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11628..11822
-----------------
DNA (195bp)
protein (65aa)
50S ribosomal protein L35 n=1 Tax=Moritella dasanensis RepID=UPI0002F10196
large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus b
DolZOral124_scaffold_608_16
Yersinia ruckeri, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11866..12222
-----------------
DNA (357bp)
protein (119aa)
50S ribosomal protein L20 n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UFW5_YERRU
rplT; ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=29486 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Y
DolZOral124_scaffold_608_17
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12330..13325
-----------------
DNA (996bp)
protein (332aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
phenylalanyl-tRNA synthetase n=1 Tax=Fangia hongkongensis RepID=UPI00037586CE
Phenylalanyl-tRNA synthetase subunit alpha
DolZOral124_scaffold_608_18
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13341..15722
-----------------
DNA (2382bp)
protein (794aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
phenylalanyl-tRNA synthetase n=1 Tax=Methylobacter marinus RepID=UPI00037CB377
Phenylalanyl-tRNA synthetase subunit beta
DolZOral124_scaffold_608_19
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15728..16027
-----------------
DNA (300bp)
protein (100aa)
Integration host factor subunit alpha n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8I3_9GAMM
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=638300 species="Bacteria; Proteobacter
ihfA; integration host factor subunit alpha
DolZOral124_scaffold_608_20
unknown

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16140..17279
-----------------
DNA (1140bp)
protein (380aa)

This feature has no annotations

DolZOral124_scaffold_608_21
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17276..18622
-----------------
DNA (1347bp)
protein (449aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JD29_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI20242.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C
DolZOral124_scaffold_608_22
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18838..20097
-----------------
DNA (1260bp)
protein (420aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=638300 species="Bacteria; Proteobacteria;
pcnB; poly(A) polymerase PcnB (EC:2.7.7.19)
Poly(A) polymerase I n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9R1_9GAMM
DolZOral124_scaffold_608_23
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20097..20609
-----------------
DNA (513bp)
protein (171aa)
2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase {ECO:0000313|EMBL:CDI01229.1}; EC=2.7.6.3 {ECO:0000313|EMBL:CDI01229.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaprote
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (EC:2.7.6.3)
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D7E7_LARHH
DolZOral124_scaffold_608_24
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20587..21369
-----------------
DNA (783bp)
protein (261aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1FZW3_9GAMM
DolZOral124_scaffold_608_25
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

21649..22566
-----------------
DNA (918bp)
protein (306aa)
Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QW45_CHLT3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF14699.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATC
DolZOral124_scaffold_608_26
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22787..24334
-----------------
DNA (1548bp)
protein (516aa)
Integral membrane protein MviN n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZFZ8_9GAMM rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="
mviN; virulence factor MviN family protein
DolZOral124_scaffold_608_27
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24348..25475
-----------------
DNA (1128bp)
protein (376aa)
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteria
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=MNMA_DICNV
DolZOral124_scaffold_608_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25475..26158
-----------------
DNA (684bp)
protein (228aa)
High frequency lysogenization protein HflD homolog n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L248_HALNC
hypothetical protein
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothioba
DolZOral124_scaffold_608_29
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26361..26927
-----------------
DNA (567bp)
protein (189aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C311_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDI01950.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
DolZOral124_scaffold_608_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27089..28543
-----------------
DNA (1455bp)
protein (485aa)
Pep581 peptidase (EC:3.4.13.3); K01270 dipeptidase D [EC:3.4.13.-] Tax=GWE2_Bacteroidetes_40_63_curated
Aminoacyl-histidine dipeptidase id=4225345 bin=GWF2_Bacteroidetes_43_11 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
aminoacyl-histidine dipeptidase
Displaying items 1-30 of 57 in total

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