ggKbase home page

DolZOral124_scaffold_727

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_727_1
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..294)
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00300.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
transposase IS200-family protein
DolZOral124_scaffold_727_2
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(356..1255)
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LS96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFU75269.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburr
ORF6N domain.
DolZOral124_scaffold_727_3
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(1266..2297)
-----------------
DNA (1032bp)
protein (344aa)
DNA protecting protein DprA n=1 Tax=Pantoea ananatis LMG 5342 RepID=G9AVU1_PANAN
smf; DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:ADY72733.1}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium ther
DolZOral124_scaffold_727_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2290..3807)
-----------------
DNA (1518bp)
protein (506aa)
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARK9_9CLOT
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein {ECO:0000313|EMBL:EOC99316.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" sourc
Mg chelatase subunit ChlI
DolZOral124_scaffold_727_5
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3971..5041)
-----------------
DNA (1071bp)
protein (357aa)
Protein HflC n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUZ8_9CLOT
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
HflC protein
DolZOral124_scaffold_727_6
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5031..5969)
-----------------
DNA (939bp)
protein (313aa)
HflK protein n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUT5_9CLOT
HflK protein {ECO:0000313|EMBL:CDF59321.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
HflK protein
DolZOral124_scaffold_727_7
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5983..6579)
-----------------
DNA (597bp)
protein (199aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQG4_9CLOT
Membrane protein {ECO:0000313|EMBL:KGG79704.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
hypothetical protein
DolZOral124_scaffold_727_8
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6576..7448)
-----------------
DNA (873bp)
protein (291aa)
33 kDa chaperonin n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NZG5_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262884 species="Bacteria; Firmicutes; Clostr
Disulfide bond chaperones of the HSP33 family
DolZOral124_scaffold_727_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7450..8187)
-----------------
DNA (738bp)
protein (246aa)
Methyltransferase domain n=1 Tax=Clostridium sp. CAG:81 RepID=R5GCZ6_9CLOT
Methyltransferase domain.
Methyltransferase domain {ECO:0000313|EMBL:CCY10682.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu
DolZOral124_scaffold_727_10
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8243..10174)
-----------------
DNA (1932bp)
protein (644aa)
Putative DNA helicase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D0W4_HALOH
putative DNA helicase
Putative DNA helicase {ECO:0000313|EMBL:ACL68933.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strai
DolZOral124_scaffold_727_11
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10171..11064)
-----------------
DNA (894bp)
protein (298aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030E8401
Transporter {ECO:0000313|EMBL:EYE88569.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
Transporter
DolZOral124_scaffold_727_12
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11245..12585)
-----------------
DNA (1341bp)
protein (447aa)
TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CGY5_9CLOT
TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex {ECO:0000313|EMBL:EOD01565.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibact
TldD/PmbA family protein
DolZOral124_scaffold_727_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12594..13982)
-----------------
DNA (1389bp)
protein (463aa)
Protein TldD n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M8P6_9CLOT
tldD; protein TldD
Protein TldD {ECO:0000313|EMBL:AGF54304.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HM
DolZOral124_scaffold_727_14
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14003..14788)
-----------------
DNA (786bp)
protein (262aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00036EE67E
RNA methyltransferase, TrmH family, group 3
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:AJQ29242.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus
DolZOral124_scaffold_727_15
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14775..15206)
-----------------
DNA (432bp)
protein (144aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01
Mini-ribonuclease 3 n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X7P6_ANEAE
hypothetical protein
DolZOral124_scaffold_727_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15235..16644)
-----------------
DNA (1410bp)
protein (470aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase id=2064404 bin=GWE2_Clostridiales_32_10 species=Butyrivibrio crossotus genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_727_17
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(16880..18361)
-----------------
DNA (1482bp)
protein (494aa)
gltX; glutamate--tRNA ligase GltX (EC:6.1.1.17)
Glutamyl-tRNA synthetase family protein n=1 Tax=Trichomonas vaginalis RepID=A2FJ97_TRIVA
Glutamyl-tRNA synthetase {ECO:0000313|EMBL:AHZ59530.1}; Glutamyl-tRNA synthetase family protein {ECO:0000313|EMBL:EAX95011.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadid
DolZOral124_scaffold_727_18
Bacillus indicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18461..18730)
-----------------
DNA (270bp)
protein (90aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1458122 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillu
acylphosphatase (EC:3.6.1.7)
acylphosphatase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DC4A
DolZOral124_scaffold_727_19
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18843..19109)
-----------------
DNA (267bp)
protein (89aa)
Cysteine-rich small domain protein n=2 Tax=Clostridium bifermentans RepID=T4VUK1_CLOBI
Cysteine-rich small domain protein {ECO:0000313|EMBL:EQK44790.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridiu
metal-binding protein
DolZOral124_scaffold_727_20
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19316..19777)
-----------------
DNA (462bp)
protein (154aa)
Chemotaxis protein, CheW-like protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXT7_CLOA9
chemotaxis protein, CheW-like protein
Chemotaxis protein, CheW-like protein {ECO:0000313|EMBL:AFS77999.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC
DolZOral124_scaffold_727_21
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19791..21314)
-----------------
DNA (1524bp)
protein (508aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Clostridium ultunense Esp RepID=M1ZFI3_9CLOT
DolZOral124_scaffold_727_22
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21407..26680)
-----------------
DNA (5274bp)
protein (1758aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AY99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD01662.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
diguanylate cyclase
DolZOral124_scaffold_727_23
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26842..27936)
-----------------
DNA (1095bp)
protein (365aa)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI00031300C5
4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH Tax=S_Thermoanaerobacterales_50_218
rpsA; 30S ribosomal protein S1
DolZOral124_scaffold_727_24
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27956..29332)
-----------------
DNA (1377bp)
protein (459aa)
Putative Thymidylate synthase (FAD) (ThyX) n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VIB6_CLOAI
Strain NCTC 7096 contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIV57485.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneur
DolZOral124_scaffold_727_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29420..30706)
-----------------
DNA (1287bp)
protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EDS10990.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDS10990.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;"
serS2; seryl-tRNA synthetase SerS (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBL5_9FIRM
DolZOral124_scaffold_727_26
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31035..31733)
-----------------
DNA (699bp)
protein (233aa)
Uncharacterized protein n=1 Tax=Dialister invisus CAG:218 RepID=R5TCD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ54777.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialist
hypothetical protein
DolZOral124_scaffold_727_27

Not on your lists

comp(31920..33734)
-----------------
DNA (1815bp)
protein (605aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2F380_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE05245.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
methyl-accepting chemotaxis sensory transducer
DolZOral124_scaffold_727_28
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33945..34217)
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJ92_ACEWD
hypothetical protein
Competence protein ComF {ECO:0000313|EMBL:KJF28132.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
DolZOral124_scaffold_727_29
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34278..34949)
-----------------
DNA (672bp)
protein (224aa)
putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD (EC:3.4.23.43)
Putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD {ECO:0000313|EMBL:CBH20350.1}; EC=3.4.23.43 {ECO:0000313|EMBL:CBH20350.1};; TaxID=499177 species="Bacteria; Firmicut
Putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU89_CLOSD
DolZOral124_scaffold_727_30
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34933..36510)
-----------------
DNA (1578bp)
protein (526aa)
S-layer domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTT1_ALKMQ
S-layer protein
S-layer domain protein {ECO:0000313|EMBL:ABR49599.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus met
Displaying items 1-30 of 50 in total

View Taxonomy