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DolZOral124_scaffold_730

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_730_1
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27..434)
-----------------
DNA (408bp)
protein (136aa)
Fe-S metabolism associated family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQR8_9RHOB
Fe-S metabolism associated family protein {ECO:0000313|EMBL:EBA17624.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="
Fe-S metabolism associated family protein
DolZOral124_scaffold_730_2
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

571..1089
-----------------
DNA (519bp)
protein (173aa)
Lipoprotein, putative n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SN27_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEJ97667.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
lipoprotein
DolZOral124_scaffold_730_3
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1135..2298)
-----------------
DNA (1164bp)
protein (388aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=439496 species="Bacteria; Proteobacteria; Alph
Ribonuclease D n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BCX2_9RHOB rbh
ribonuclease D
DolZOral124_scaffold_730_4
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2373..3023)
-----------------
DNA (651bp)
protein (217aa)
Phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E5B2_9RHOB rbh
DolZOral124_scaffold_730_5
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2963..4009)
-----------------
DNA (1047bp)
protein (349aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQR4_9RHOB rbh
phosphoribosylformylglycinamidine cyclo-ligase
DolZOral124_scaffold_730_trna_1
unknown

Not on your lists

4126..4199
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_730_trna_5
unknown

Not on your lists

comp(4474..4556)
-----------------
DNA (83bp)
transferRNA
DolZOral124_scaffold_730_6
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4696..5274
-----------------
DNA (579bp)
protein (193aa)
DedA family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNK2_9RHOB rbh
DedA family protein {ECO:0000313|EMBL:EDM71855.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3
DedA family protein
DolZOral124_scaffold_730_7
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5271..5753
-----------------
DNA (483bp)
protein (161aa)
Disulphide bond formation protein DsbB n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BEK1_9RHOB
Dihydroneopterin aldolase {ECO:0000313|EMBL:KGB82642.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. N
dihydroneopterin aldolase
DolZOral124_scaffold_730_8
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5760..6191)
-----------------
DNA (432bp)
protein (144aa)
Transcriptional regulator, AsnC family protein n=1 Tax=Roseovarius sp. 217 RepID=A3VVW1_9RHOB
Transcriptional regulator
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_730_9
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6310..7224
-----------------
DNA (915bp)
protein (305aa)
rocF; arginase (EC:3.5.3.1)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.
Arginase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LRK8_RUEPO rbh
DolZOral124_scaffold_730_10
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7237..7782
-----------------
DNA (546bp)
protein (182aa)
Amidinotransferase family protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GHG9_RUEST
amidinotransferase
Amidinotransferase family protein {ECO:0000313|EMBL:ABF63897.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp
DolZOral124_scaffold_730_11
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7795..8841
-----------------
DNA (1047bp)
protein (349aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:EDZ48758.1}; EC=4.3.1.12 {ECO:0000313|EMBL:EDZ48758.1};; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhod
Ornithine cyclodeaminase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BE97_9RHOB rbh
ornithine cyclodeaminase
DolZOral124_scaffold_730_12
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9039..9287)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q163Z8_ROSDO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG32695.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitr
DolZOral124_scaffold_730_13
unknown

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9323..9970
-----------------
DNA (648bp)
protein (216aa)

This feature has no annotations

DolZOral124_scaffold_730_14
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10213..13902)
-----------------
DNA (3690bp)
protein (1230aa)
Ribonucleotide-diphosphate reductase alpha subunit {ECO:0000313|EMBL:EDM30887.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EDM30887.1};; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
Ribonucleotide-diphosphate reductase alpha subunit n=1 Tax=Roseovarius sp. TM1035 RepID=A6E368_9RHOB rbh
ribonucleotide-diphosphate reductase subunit alpha
DolZOral124_scaffold_730_15
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14473..14976
-----------------
DNA (504bp)
protein (168aa)
Lipoprotein, putative n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CG57_9RHOB
Lipoprotein, putative {ECO:0000313|EMBL:EAR51672.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus
DolZOral124_scaffold_730_trna_4
unknown

Not on your lists

comp(16033..16106)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_730_16
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16216..17214)
-----------------
DNA (999bp)
protein (333aa)
ABC transporter, periplasmic substrate-binding protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LSI0_RUEPO rbh
ABC transporter, periplasmic substrate-binding protein
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM48808.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;"
DolZOral124_scaffold_730_17
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17258..18103)
-----------------
DNA (846bp)
protein (282aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0FCG5_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:KJZ25300.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis.;"
binding-protein-dependent transport system inner membrane protein
DolZOral124_scaffold_730_18
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18100..19026)
-----------------
DNA (927bp)
protein (309aa)
ABC transporter, permease protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CST2_9RHOB rbh
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:EEX11130.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacte
DolZOral124_scaffold_730_19
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19013..19795)
-----------------
DNA (783bp)
protein (261aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruegeria sp. R11 RepID=B7QTY4_9RHOB rbh
Pyrimidine ABC transporter, ATP-binding protein
Pyrimidine ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHM05644.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;
DolZOral124_scaffold_730_20
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19799..21256)
-----------------
DNA (1458bp)
protein (486aa)
dht; D-hydantoinase/dihydropyrimidinase Dht (EC:3.5.2.2)
Dihydropyrimidinase n=1 Tax=Ruegeria sp. R11 RepID=B7QTY5_9RHOB rbh
Dihydropyrimidinase {ECO:0000313|EMBL:KIC17616.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.
DolZOral124_scaffold_730_21
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21472..22722)
-----------------
DNA (1251bp)
protein (417aa)
allantoate amidohydrolase n=1 Tax=Oceanicola sp. S124 RepID=UPI000255A9A4 rbh
Allantoate amidohydrolase {ECO:0000313|EMBL:EEX11134.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacusc
amidase, hydantoinase/carbamoylase family
DolZOral124_scaffold_730_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23005..23622
-----------------
DNA (618bp)
protein (206aa)
Transcriptional regulator, TetR family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U3J8_9RHOB
TetR family transcriptional regulator; K09017 TetR/AcrR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
transcriptional regulator, TetR family
DolZOral124_scaffold_730_trna_3
unknown

Not on your lists

comp(23840..23911)
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_730_23
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23930..24445)
-----------------
DNA (516bp)
protein (172aa)
DNA-binding protein HU, putative n=1 Tax=Sagittula stellata E-37 RepID=A3K1H0_9RHOB
DNA-binding protein HU, putative {ECO:0000313|EMBL:EBA08766.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula s
DNA-binding protein HU, putative
DolZOral124_scaffold_730_24
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24903..27359)
-----------------
DNA (2457bp)
protein (819aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CRL0_9RHOB rbh
DolZOral124_scaffold_730_25
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27580..28662
-----------------
DNA (1083bp)
protein (361aa)
Flagellar motor switch protein FliG, putative n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FP10_9RHOB rbh
Flagellar motor switch protein FliG, putative {ECO:0000313|EMBL:EDM72013.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" sour
fliG; flagellar motor switch protein FliG
DolZOral124_scaffold_730_26
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29102..30478
-----------------
DNA (1377bp)
protein (459aa)
UPI0003D1C84E related cluster n=1 Tax=unknown RepID=UPI0003D1C84E rbh
Putative lipoprotein {ECO:0000313|EMBL:KHQ51071.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTA
hypothetical protein
Displaying items 1-30 of 55 in total

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