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DolZOral124_scaffold_738

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_738_trna_1
unknown

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1..82
-----------------
DNA (82bp)
transferRNA
DolZOral124_scaffold_738_1
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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306..845
-----------------
DNA (540bp)
protein (180aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37448.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
PAP2 family protein
DolZOral124_scaffold_738_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1064..1603
-----------------
DNA (540bp)
protein (180aa)
DNA-binding protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MR36_CLOSA
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AGX42141.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 1386
DolZOral124_scaffold_738_3
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1612..2664
-----------------
DNA (1053bp)
protein (351aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostr
potA; spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
Polyamine ABC transporter, ATP-binding protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SM25_9FIRM
DolZOral124_scaffold_738_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2651..3466
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000374F06C
binding--dependent transport system inner membrane component family protein
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AIY83583.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
DolZOral124_scaffold_738_5
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3459..4283
-----------------
DNA (825bp)
protein (275aa)
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CMJ4_9CLOT
Spermidine/putrescine transport system permease protein PotC {ECO:0000313|EMBL:KDR96257.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
potC; spermidine/putrescine ABC transporter permease 2
DolZOral124_scaffold_738_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4295..5326
-----------------
DNA (1032bp)
protein (344aa)
ABC transporter, periplasmic spermidine putrescine-binding protein PotD n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CC92_9CLOT
ABC transporter, periplasmic spermidine putrescine-binding protein PotD {ECO:0000313|EMBL:EOC99919.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisali
extracellular solute-binding protein
DolZOral124_scaffold_738_7
Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5469..6851
-----------------
DNA (1383bp)
protein (461aa)
S-layer domain-containing protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E38C
s-layer domain-containing protein
S-layer domain-containing protein {ECO:0000313|EMBL:ADQ40357.1}; Flags: Precursor;; TaxID=632335 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. I
DolZOral124_scaffold_738_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6916..7653)
-----------------
DNA (738bp)
protein (246aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=537013 spec
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHQ1_9CLOT
DolZOral124_scaffold_738_9
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7734..8924)
-----------------
DNA (1191bp)
protein (397aa)
Probable tRNA sulfurtransferase {ECO:0000255|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000255|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000255|HAMAP-Rule:MF_00021}; Thiam
Probable tRNA sulfurtransferase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=THII_ALKMQ
thiamine biosynthesis protein ThiI
DolZOral124_scaffold_738_10
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

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comp(8925..10082)
-----------------
DNA (1158bp)
protein (386aa)
Aminotransferase class V n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A0N7_NATTJ
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACB85917.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophil
DolZOral124_scaffold_738_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10191..11183
-----------------
DNA (993bp)
protein (331aa)
L-asparaginase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CCA8_9CLOT
Asparaginase {ECO:0000313|EMBL:KGG79766.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
asparaginase/glutaminase
DolZOral124_scaffold_738_12
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11187..13478)
-----------------
DNA (2292bp)
protein (764aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQK1_CLOC7
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ADL52207.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovo
DolZOral124_scaffold_738_13
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13475..15805)
-----------------
DNA (2331bp)
protein (777aa)
Putative Signal transduction protein containing diguanylate cyclase/phosphodiesterase domain (GGDEF) and domain (EAL) n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWZ1_CLOSD
Diguanylate cyclase {ECO:0000313|EMBL:KJF26907.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
putative Signal transduction protein containing diguanylate cyclase/phosphodiesterase domain (GGDEF) and domain (EAL)
DolZOral124_scaffold_738_14
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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16082..18607
-----------------
DNA (2526bp)
protein (842aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HJD7_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHL14624.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostrept
sensory box/GGDEF family protein
DolZOral124_scaffold_738_15
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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18735..19367
-----------------
DNA (633bp)
protein (211aa)
50S ribosomal protein L25 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LS41_TEPAE
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000313|EMBL:CCP24782.1}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=1209989 species="Bacteria; Firmicutes; Clo
DolZOral124_scaffold_738_16
unknown

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comp(19477..20400)
-----------------
DNA (924bp)
protein (308aa)

This feature has no annotations

DolZOral124_scaffold_738_17
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20457..21413)
-----------------
DNA (957bp)
protein (319aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E3Q1_9FIRM rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:CDA91874.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environm
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
DolZOral124_scaffold_738_18
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21635..22825
-----------------
DNA (1191bp)
protein (397aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MRD9_9CLOT
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF25836.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family
DolZOral124_scaffold_738_19
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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22944..23852
-----------------
DNA (909bp)
protein (303aa)
Branched-chain amino acid transport system / permease component family protein id=2177753 bin=GWB2_Clostridiales_37_7 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
livH1; high-affinity branched-chain amino acid transport system permease protein LivH
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_738_20
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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23854..24909
-----------------
DNA (1056bp)
protein (352aa)
Inner-membrane translocator n=1 Tax=Thermincola potens (strain JR) RepID=D5XC50_THEPJ
inner-membrane translocator
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_738_21
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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24909..25670
-----------------
DNA (762bp)
protein (254aa)
Phosphonate-transporting ATPase id=2177751 bin=GWB2_Clostridiales_37_7 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
ABC transporter
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_738_22
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25670..26374
-----------------
DNA (705bp)
protein (235aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter related protein id=2177750 bin=GWB2_Clostridiales_37_7 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_738_23
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(26405..27715)
-----------------
DNA (1311bp)
protein (437aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:ACF14868.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ACF14868.1};; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroher
Deoxyribodipyrimidine photo-lyase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX58_CHLT3
deoxyribodipyrimidine photo-lyase
DolZOral124_scaffold_738_24
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27899..30964)
-----------------
DNA (3066bp)
protein (1022aa)
diguanylate cyclase n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031AC3F6
Diguanylate cyclase {ECO:0000313|EMBL:EQB20938.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
DolZOral124_scaffold_738_25
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30973..34065)
-----------------
DNA (3093bp)
protein (1031aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXY8_CLOCD
signal transduction protein containing an EAL domain
Signal transduction protein containing an EAL domain {ECO:0000313|EMBL:AFA48601.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Ace
DolZOral124_scaffold_738_26
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34243..35082)
-----------------
DNA (840bp)
protein (280aa)
ATPase involved in chromosome partitioning n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZ70_CLOCD
chromosome partitioning ATPase
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AEV70032.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridi
DolZOral124_scaffold_738_27
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(35101..35682)
-----------------
DNA (582bp)
protein (194aa)
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Molybdenum hydroxylase accessory protein, YgfJ family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KUE8_9FIRM
molybdenum hydroxylase accessory protein, YgfJ family
DolZOral124_scaffold_738_28
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35950..37212
-----------------
DNA (1263bp)
protein (421aa)
Glutamate dehydrogenase n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GLV1_9FUSO rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
Glu/Leu/Phe/Val dehydrogenase
DolZOral124_scaffold_738_29
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(37329..38393)
-----------------
DNA (1065bp)
protein (355aa)
Putative PTS system, EIIC component n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H6L9_ILYPC
putative PTS system, EIIC component
Putative PTS system, EIIC component {ECO:0000313|EMBL:ADO81904.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain
Displaying items 1-30 of 43 in total

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