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DolZOral124_scaffold_2130

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2130_1
unknown

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comp(3..134)
DNA (132bp) protein (44aa)

This feature has no annotations

DolZOral124_scaffold_2130_2
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(272..1024)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P0H0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KJE40150.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
alpha/beta hydrolase
DolZOral124_scaffold_2130_3
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1504..2529)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI00030B2BE0 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ35641.1}; TaxID=1536770 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0345.;"
DolZOral124_scaffold_2130_4
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2824..3222
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM80 RepID=J3ISY4_9PSED
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
DolZOral124_scaffold_2130_5
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3415..4479
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WH48_VEREI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM56955.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobact
DolZOral124_scaffold_2130_6
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4669..5883
DNA (1215bp) protein (405aa)
ispG_[H]; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI00036F06CD
DolZOral124_scaffold_2130_7
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5928..7319
DNA (1392bp) protein (464aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2FWZ7_OCESG
mnmC; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein
DolZOral124_scaffold_2130_8
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7415..8944
DNA (1530bp) protein (510aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ACB80507.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACB80507.1};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriacea
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036D9AAD
methylmalonyl-CoA mutase
DolZOral124_scaffold_2130_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8941..11103
DNA (2163bp) protein (721aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ESR22740.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ESR22740.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Luti
mutB; Methylmalonyl-CoA mutase large subunit (MCM-alpha) (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHJ0_9RHIZ
DolZOral124_scaffold_2130_10
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11188..12192
DNA (1005bp) protein (335aa)
LAO/AO transport system ATPase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7VCH1_DESML
LAO/AO transport system ATPase {ECO:0000313|EMBL:EPR42163.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desu
membrane ATPase/protein kinase
DolZOral124_scaffold_2130_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12158..12517)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037684E0
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
DolZOral124_scaffold_2130_12
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12504..13190)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQM9_DESPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG35344.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea ps
DolZOral124_scaffold_2130_13
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13290..13814
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1J2_9RHOB
DolZOral124_scaffold_2130_14
Salinivibrio sp. KP-1, Salinivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13833..14369)
DNA (537bp) protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:KKA43979.1}; TaxID=1406902 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Salinivibrio.;" source="Salinivibrio sp. KP-1.;"
competence protein ComEA-like protein with helix-hairpin-helix repeat region; K02237 competence protein ComEA id=14632071 bin=bin9_gal15 species=Smaragdicoccus niigatensis genus=Smaragdicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
ComE operon protein 1
DolZOral124_scaffold_2130_15
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14493..15515)
DNA (1023bp) protein (341aa)
cytochrome oxidase assembly protein n=1 Tax=Methylobacter marinus RepID=UPI00036B1065 rbh
Cytochrome oxidase assembly {ECO:0000313|EMBL:ESS72961.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methylogl
cytochrome oxidase assembly
DolZOral124_scaffold_2130_16
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15667..16932
DNA (1266bp) protein (422aa)
ABC transporter substrate-binding protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026282E3 rbh
Jannaschia aquimarina strain GSW-M26 jaqu_contig000081, whole genome shotgun sequence {ECO:0000313|EMBL:KIT14306.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterale
NMT1/THI5-like domain-containing protein
DolZOral124_scaffold_2130_17
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16966..17730
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMJ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR23534.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
DolZOral124_scaffold_2130_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17872..20112
DNA (2241bp) protein (747aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00036F7DF4 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW95081.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
cyclic nucleotide-binding protein
DolZOral124_scaffold_2130_19
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20134..21012
DNA (879bp) protein (293aa)
Uncharacterized protein required for formate dehydrogenase activity n=1 Tax=Beggiatoa alba B18LD RepID=I3CKU0_9GAMM rbh
Uncharacterized protein required for formate dehydrogenase activity {ECO:0000313|EMBL:EIJ44233.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; B
formate dehydrogenase
DolZOral124_scaffold_2130_20
unknown

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comp(21134..23308)
DNA (2175bp) protein (725aa)

This feature has no annotations

DolZOral124_scaffold_2130_21
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23530..24201)
DNA (672bp) protein (224aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=1 Tax=Pseudomonas putida S610 RepID=V6J4W9_PSEPU
endonuclease III
DolZOral124_scaffold_2130_22
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24474..25268
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1LP17_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG44042.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
hypothetical protein
DolZOral124_scaffold_2130_23
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25379..26185)
DNA (807bp) protein (269aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=331869 species="Bacteria; Proteob
Repressor lexA (EC:3.4.21.88)
LexA repressor n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUH7_9PROT
DolZOral124_scaffold_2130_24
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26349..27086
DNA (738bp) protein (246aa)
Anti-ECFsigma factor, ChrR n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9Q2R1_9CYAN
anti-ECFsigma factor ChrR
Anti-ECFsigma factor, ChrR {ECO:0000313|EMBL:AFY39344.1}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
DolZOral124_scaffold_2130_25
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27031..28305
DNA (1275bp) protein (425aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1248727 specie
Epoxyqueuosine reductase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BI27_9GAMM
iron-sulfur cluster binding protein
DolZOral124_scaffold_2130_26
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28888..29796
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037ACD4C
Uncharacterized protein {ECO:0000313|EMBL:ESQ11528.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
hypothetical protein
DolZOral124_scaffold_2130_27
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30148..30309)
DNA (162bp) protein (54aa)
Integrase, catalytic region n=1 Tax=Shewanella sp. (strain W3-18-1) RepID=A1RH22_SHESW
integrase catalytic subunit
Integrase {ECO:0000313|EMBL:AJR06215.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbulicola Gung47.;"
Displaying 27 items

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