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DolZOral124_scaffold_1041

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1041_1
unknown

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)

This feature has no annotations

DolZOral124_scaffold_1041_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(805..1743)
DNA (939bp) protein (313aa)
Sensory box GGDEF domain-containing protein n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0J6W6_9PSED
diguanylate cyclase Tax=RBG_16_Gamma2_65_34_curated
DeoR family transcriptional regulator
DolZOral124_scaffold_1041_3
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1839..2279)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE31 RepID=UPI00037F359E
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:EHQ52259.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" s
pentapeptide repeat-containing protein
DolZOral124_scaffold_1041_4
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2286..3014)
DNA (729bp) protein (243aa)
RNA polymerase sigma factor FliA n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WUA3_HALHL
FliA/WhiG family RNA polymerase sigma factor
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma
DolZOral124_scaffold_1041_5
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3025..3972)
DNA (948bp) protein (316aa)
Site-determining protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BEH7_9GAMM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
fleN; flagellar synthesis regulator FleN
DolZOral124_scaffold_1041_6
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4198..5667)
DNA (1470bp) protein (490aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BV80_NITHN rbh
ATPase AAA {ECO:0000313|EMBL:AKH22022.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
Fis family transcriptional regulator
DolZOral124_scaffold_1041_7
unknown

Not on your lists

6041..6259
DNA (219bp) protein (73aa)

This feature has no annotations

DolZOral124_scaffold_1041_8
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6462..6920)
DNA (459bp) protein (153aa)
16 kDa heat shock protein A n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PBM9_CELJU
16 kDa heat shock protein A
16 kDa heat shock protein A {ECO:0000313|EMBL:ACE84494.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japo
DolZOral124_scaffold_1041_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7070..7780
DNA (711bp) protein (237aa)
Ferredoxin n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RUE6_9RHIZ
Ferredoxin {ECO:0000313|EMBL:ESR26700.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
DolZOral124_scaffold_1041_trna_1
unknown

Not on your lists

7900..7972
DNA (73bp)
transferRNA
DolZOral124_scaffold_1041_10
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8040..8834)
DNA (795bp) protein (265aa)
putative hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
Hydroxyacylglutathione hydrolase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LII3_DINSH
DolZOral124_scaffold_1041_11
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8870..10279)
DNA (1410bp) protein (470aa)
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=28885 species="Bacteria; Pro
glutaminyl-tRNA synthetase n=1 Tax=Algicola sagamiensis RepID=UPI00037CFFE6
DolZOral124_scaffold_1041_12
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10583..11314
DNA (732bp) protein (244aa)
Protein phosphatase PrpC n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY46_9GAMM
protein phosphatase
Protein phosphatase {ECO:0000313|EMBL:AKA21578.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaph
DolZOral124_scaffold_1041_13

Not on your lists

comp(11325..11717)
DNA (393bp) protein (131aa)
Death-on-curing family protein n=1 Tax=uncultured bacterium RepID=D5MT23_9BACT
Death-on-curing family protein {ECO:0000313|EMBL:BAJ06973.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
death-on-curing family protein
DolZOral124_scaffold_1041_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11714..11938)
DNA (225bp) protein (75aa)
transcriptional regulator n=1 Tax=Methylobacter marinus RepID=UPI000367BCEF
addiction module antidote
Addiction module antidote {ECO:0000313|EMBL:ACX96805.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobac
DolZOral124_scaffold_1041_15
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12140..14770)
DNA (2631bp) protein (877aa)
ATP-dependent chaperone ClpB n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GN47_THISH
ATP-dependent Clp protease ATP-binding subunit ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
DolZOral124_scaffold_1041_16
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15375..15635)
DNA (261bp) protein (87aa)
Addiction module antitoxin, Axe family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9H4_9CAUL
Addiction module antitoxin, Axe family Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
DolZOral124_scaffold_1041_17
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16068..16841)
DNA (774bp) protein (258aa)
ABC transporter permease protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RGH5_9RHOB rbh
ABC transporter permease protein
ABC transporter permease protein {ECO:0000313|EMBL:AGI71724.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octade
DolZOral124_scaffold_1041_18
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16838..17566)
DNA (729bp) protein (243aa)
Taurine import ATP-binding protein TauB n=1 Tax=Roseobacter sp. GAI101 RepID=B7RRI0_9RHOB rbh
ABC transporter ATPase {ECO:0000313|EMBL:KEJ93865.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter ps
ABC transporter ATP-binding protein
DolZOral124_scaffold_1041_19
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17536..18249)
DNA (714bp) protein (238aa)
TENA/THI-4 family protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RRI1_9RHOB rbh
TENA/THI-4 family protein {ECO:0000313|EMBL:EEB82790.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp.
tenA; transcriptional regulator
DolZOral124_scaffold_1041_20
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18246..19184)
DNA (939bp) protein (313aa)
Putative thiamine biosynthesis protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RMP6_9RHOB rbh
putative thiamine biosynthesis protein
Putative thiamine biosynthesis protein {ECO:0000313|EMBL:AGI71721.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="
DolZOral124_scaffold_1041_21
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19181..19996)
DNA (816bp) protein (272aa)
thiD2; phosphomethylpyrimidine kinase2 (EC:2.7.4.7)
Phosphomethylpyrimidine kinase2 {ECO:0000313|EMBL:AGI71720.1}; EC=2.7.4.7 {ECO:0000313|EMBL:AGI71720.1};; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
Phosphomethylpyrimidine kinase2 n=1 Tax=Octadecabacter arcticus 238 RepID=M9RPJ2_9RHOB rbh
DolZOral124_scaffold_1041_22
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19993..20628)
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiE1; thiamine-phosphate pyrophosphorylase ThiE (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RGH0_9RHOB
DolZOral124_scaffold_1041_23
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20625..21401)
DNA (777bp) protein (259aa)
thiM; hydroxyethylthiazole kinase ThiM (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethy
Hydroxyethylthiazole kinase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7Z9S2_ROSLO rbh
DolZOral124_scaffold_1041_24
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21556..22365)
DNA (810bp) protein (270aa)
membrane protein n=1 Tax=Marinobacterium stanieri RepID=UPI000255957B
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
DolZOral124_scaffold_1041_25
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22448..23512)
DNA (1065bp) protein (355aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteri
23S rRNA pseudouridine synthase D n=1 Tax=Halomonas sp. KM-1 RepID=UPI0002899228
rluD; Pseudouridine synthase
DolZOral124_scaffold_1041_26
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23539..24354
DNA (816bp) protein (272aa)
Outer membrane protein assembly factor BamD n=1 Tax=Beggiatoa alba B18LD RepID=I3CKM0_9GAMM
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Be
transmembrane protein
DolZOral124_scaffold_1041_27
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24455..26071
DNA (1617bp) protein (539aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" sour
Nitrogen regulatory protein P-II n=2 Tax=sulfur-oxidizing symbionts RepID=G2DC90_9GAMM
histidine kinase
DolZOral124_scaffold_1041_28
Neisseria lactamica, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26071..27801
DNA (1731bp) protein (577aa)
Identified by MetaGeneAnnotator n=1 Tax=Neisseria lactamica Y92-1009 RepID=E1P4D0_NEILA
transcriptional regulator
Identified by MetaGeneAnnotator {ECO:0000313|EMBL:CBX23015.1}; TaxID=869214 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria lactamica
DolZOral124_scaffold_1041_29
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28112..28564
DNA (453bp) protein (151aa)
Prepilin peptidase dependent protein D n=1 Tax=Shewanella halifaxensis (strain HAW-EB4) RepID=B0TQQ3_SHEHH
Pilus biogenesis protein tapA; K02650 type IV pilus assembly protein PilA Tax=CG_Rhodof_04
prepilin peptidase dependent protein D
Displaying items 1-30 of 79 in total

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