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DolZOral124_scaffold_2525

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2525_1

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620..1345
DNA (726bp) protein (242aa)
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=73138 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
DolZOral124_scaffold_2525_2

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1524..1997
DNA (474bp) protein (158aa)
Translation initiation factor IF-3 n=1 Tax=uncultured bacterium RepID=K2D5Z9_9BACT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
InfC; translation initiation factor IF3
DolZOral124_scaffold_2525_3

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2057..2254
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXT8_9BACT
50S ribosomal protein L35 {ECO:0000256|RuleBase:RU000568}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DolZOral124_scaffold_2525_4
RIFOXYC2_FULL_PER-ii_58_32_curated, PER-ii, Bacteria

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2282..2644
DNA (363bp) protein (121aa)
50S ribosomal protein L20 n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BE82_9FIRM
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFOXYC2_FULL_PER-ii_58_32_curated
50S ribosomal protein L20
DolZOral124_scaffold_2525_5
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

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3125..4438
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:977 RepID=R5PZZ0_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
hypothetical protein
DolZOral124_scaffold_2525_6
CG_PER_02, Peregrinibacteria, Bacteria

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4451..6277
DNA (1827bp) protein (609aa)
ATP synthase, A subunit; K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] Tax=CG_PER_02
ATP synthase subunit A (EC:3.6.3.15)
V-type ATP synthase alpha chain n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ATN2_THEM3
DolZOral124_scaffold_2525_7
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6355..6771)
DNA (417bp) protein (139aa)
Iron dependent repressor, metal binding/dimerization domain protein n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0SWX3_9DELT
putative iron-dependent regulatory protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
putative iron-dependent regulatory protein
DolZOral124_scaffold_2525_8
unknown

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comp(6779..7102)
DNA (324bp) protein (108aa)

This feature has no annotations

DolZOral124_scaffold_2525_9
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(7106..10351)
DNA (3246bp) protein (1082aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
Valine--tRNA ligase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDY0_9FIRM
putative valyl-tRNA synthetase
DolZOral124_scaffold_2525_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10583..11461
DNA (879bp) protein (293aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI8_9FIRM
DolZOral124_scaffold_2525_11
unknown

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11477..13450
DNA (1974bp) protein (658aa)

This feature has no annotations

DolZOral124_scaffold_2525_12
CG_Nitrosp_01, Nitrospirae, Bacteria

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13466..13876
DNA (411bp) protein (137aa)
cytidyltransferase; K14656 FAD synthetase Tax=CG_Nitrosp_01
FAD synthase id=3967529 bin=GWF2_Nitrospirae_44_13 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
glycerol-3-phosphate cytidyltransferase
DolZOral124_scaffold_2525_13
unknown

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comp(13842..14756)
DNA (915bp) protein (305aa)

This feature has no annotations

DolZOral124_scaffold_2525_14
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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14839..16203
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000369EC7A
hypothetical protein Tax=BJP_IG2102_PER_44_74
DolZOral124_scaffold_2525_trna_1
unknown

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comp(16426..16499)
DNA (74bp)
transferRNA
DolZOral124_scaffold_2525_15
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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16567..18042
DNA (1476bp) protein (492aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=5096589 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=PER_GWF2_39_17
phosphomannomutase, phosphomannomutase / phosphoglucomutase (EC:5.4.2.8)
DolZOral124_scaffold_2525_16
unknown

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18115..18876
DNA (762bp) protein (254aa)

This feature has no annotations

DolZOral124_scaffold_2525_17
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

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19050..19466
DNA (417bp) protein (139aa)
50S ribosomal protein L16 Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5096437 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L16
DolZOral124_scaffold_2525_18
unknown

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19470..19655
DNA (186bp) protein (62aa)

This feature has no annotations

DolZOral124_scaffold_2525_19
Parcubacteria bacterium GW2011_GWA2_47_8, Parcubacteria, Bacteria

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19657..19881
DNA (225bp) protein (75aa)
30S ribosomal protein S17 n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI0003729132
30S ribosomal protein S17 {ECO:0000313|EMBL:KKU82746.1}; TaxID=1618847 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_8.;"
rpsQ; 30S ribosomal protein S17
DolZOral124_scaffold_2525_20
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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19898..20254
DNA (357bp) protein (119aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5097544 bin=PER_GWF2_39_17 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L14, large subunit ribosomal protein L14 {ECO:0000313|EMBL:KKR26543.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6
rplN; 50S ribosomal protein L14
DolZOral124_scaffold_2525_21
Facklamia hominis, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


20257..20601
DNA (345bp) protein (115aa)
50S ribosomal protein L24 n=2 Tax=Facklamia hominis RepID=K1LY79_9LACT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=883111 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia hominis CCUG 36813.;"
rplX; 50S ribosomal protein L24
DolZOral124_scaffold_2525_22
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


20608..21174
DNA (567bp) protein (189aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=BJP_IG2102_PER_44_74
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5096432 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
rplE; 50S ribosomal protein L5
DolZOral124_scaffold_2525_23
Lysinibacillus sinduriensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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21178..21432
DNA (255bp) protein (85aa)
30S ribosomal protein S14 n=1 Tax=Bacillus methanolicus MGA3 RepID=I3E3E6_BACMT
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1384057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sinduriensis BLB-1
DolZOral124_scaffold_2525_24
Weissella paramesenteroides, Weissella, Lactobacillales, Bacilli, Firmicutes, Bacteria

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21464..21841
DNA (378bp) protein (126aa)
30S ribosomal protein S8 n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R8Z9_WEIPA
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=585506 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Weissella.;" source="Weissella paramesenteroides ATC
30S ribosomal protein S8
DolZOral124_scaffold_2525_25
unknown

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21963..22130
DNA (168bp) protein (56aa)

This feature has no annotations

DolZOral124_scaffold_2525_26
R_RIF_OD1_07_49_22b, RIF-OD1-7, Parcubacteria, Bacteria

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comp(22127..23410)
DNA (1284bp) protein (428aa)
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_49_22b_curated
Putative uncharacterized protein id=2152204 bin=GWE2_Bacteroidetes_29_8 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
UDP-N-acetylmuramoylalanine/D-glutamate ligase
DolZOral124_scaffold_2525_27
CG_CPR17-01, CG_CPR17, Bacteria

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comp(23444..24307)
DNA (864bp) protein (288aa)
hemK; protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=CG_CPR17-01
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000372EDE3
SAM-dependent methyltransferase
DolZOral124_scaffold_2525_28
unknown

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comp(24328..24570)
DNA (243bp) protein (81aa)

This feature has no annotations

DolZOral124_scaffold_2525_29
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(24652..27087)
DNA (2436bp) protein (812aa)
haemin storage system lipoprotein HmsF id=5090962 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Cellulosome-anchoring protein {ECO:0000313|EMBL:KKP37761.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
lipoprotein A
Displaying 30 items

View Taxonomy