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DolZOral124_scaffold_2588

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2588_1
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(159..1370)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Vibrio genomosp. F10 RepID=UPI0003161A90
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT17504.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (str
DolZOral124_scaffold_2588_trna_1
unknown

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comp(1503..1585)
DNA (83bp)
transferRNA
DolZOral124_scaffold_2588_2

Not on your lists

comp(1599..1955)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y858_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD39085.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein translocase subunit SecG
DolZOral124_scaffold_2588_3

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comp(1965..2720)
DNA (756bp) protein (252aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=uncultured bacterium RepID=K1YPM3_9BACT
DolZOral124_scaffold_2588_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2741..3916)
DNA (1176bp) protein (392aa)
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1167006 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NC50_DESSD
DolZOral124_scaffold_2588_5
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3913..4383)
DNA (471bp) protein (157aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
Ribosomal-protein-alanine acetyltransferase n=1 Tax=uncultured bacterium RepID=K1Z365_9BACT
ribosomal-protein-alanine acetyltransferase
DolZOral124_scaffold_2588_6
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4400..5620)
DNA (1221bp) protein (407aa)
Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PLM5_DESSD
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:KJS03095.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulb
glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase
DolZOral124_scaffold_2588_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5757..6482
DNA (726bp) protein (242aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6N1_DESSD
sugar fermentation stimulation protein
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocaps
DolZOral124_scaffold_2588_8
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6648..7928)
DNA (1281bp) protein (427aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1536652 species="
dihydroorotase (EC:3.5.2.3)
Dihydroorotase id=2169798 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_2588_9
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7936..8880)
DNA (945bp) protein (315aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1536652 species="Ba
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PC98_DESSD
DolZOral124_scaffold_2588_10
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8914..9588)
DNA (675bp) protein (225aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbac
Related to signal peptidase I n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AS39_DESPS
signal peptidase I
DolZOral124_scaffold_2588_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9943..11004
DNA (1062bp) protein (354aa)
Type IV pilus assembly protein PilM n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6N6_DESSD
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AGF77372.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="De
DolZOral124_scaffold_2588_12
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11035..11619
DNA (585bp) protein (195aa)
Tfp pilus assembly protein PilN n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P1I8_DESSD
Pilus assembly protein PilN {ECO:0000313|EMBL:KJS03100.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacteri
Tfp pilus assembly protein PilN
DolZOral124_scaffold_2588_13
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11664..12278
DNA (615bp) protein (205aa)
Tfp pilus assembly protein PilO n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NC61_DESSD
Pilus assembly protein PilO {ECO:0000313|EMBL:KGO34312.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobu
Tfp pilus assembly protein PilO
DolZOral124_scaffold_2588_14
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12400..12933
DNA (534bp) protein (178aa)
Pilus assembly protein, PilP n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PCA4_DESSD
Pilus assembly protein, PilP
Pilus assembly protein, PilP {ECO:0000313|EMBL:AGF77375.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;
DolZOral124_scaffold_2588_15
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12937..14424
DNA (1488bp) protein (496aa)
Type II secretory pathway, component HofQ n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PLN6_DESSD
Uncharacterized protein {ECO:0000313|EMBL:KGO34310.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
type II secretory pathway, component HofQ
DolZOral124_scaffold_2588_16
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14477..16138
DNA (1662bp) protein (554aa)
Related to type II protein secretion protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AS33_DESPS
Uncharacterized protein {ECO:0000313|EMBL:KGO34309.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
type II protein secretion protein
DolZOral124_scaffold_2588_17
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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16190..17197
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JLC9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ13130.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
hypothetical protein
DolZOral124_scaffold_2588_18
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17284..17754)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JF19_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ13129.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
protein translocase subunit secB
DolZOral124_scaffold_2588_19
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17848..20673)
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AS30_DESPS
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC, subunit A
DolZOral124_scaffold_2588_20
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20830..21711
DNA (882bp) protein (294aa)
glycyl-tRNA synthetase alpha chain (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
Glycine--tRNA ligase alpha subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6P9_DESSD
DolZOral124_scaffold_2588_21
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21735..23609
DNA (1875bp) protein (625aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide
Signal peptide peptidase A n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5X9_DESSD
signal peptide peptidase A
DolZOral124_scaffold_2588_22
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23620..24579
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PR68_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF78876.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa s
DolZOral124_scaffold_2588_23
Campylobacter hominis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(24588..25784)
DNA (1197bp) protein (399aa)
NADH dehydrogenase ndh n=1 Tax=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) RepID=A7I3Q6_CAMHC
NADH dehydrogenase ndh
NADH dehydrogenase ndh {ECO:0000313|EMBL:ABS51619.1}; TaxID=360107 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobact
DolZOral124_scaffold_2588_24
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26037..26927)
DNA (891bp) protein (297aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
formyltetrahydrofolate synthetase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1W6_DESAT
Displaying 25 items

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