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DolZOral124_scaffold_4904

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_4904_1
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..239)
DNA (237bp) protein (79aa)
ATP phosphoribosyltransferase (homohexameric) (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7U6_DESSD
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; E
DolZOral124_scaffold_4904_2
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(256..648)
DNA (393bp) protein (131aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDG0_DESPD
DolZOral124_scaffold_4904_3
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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899..3187
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YAP7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJR98409.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
putative phytochrome sensor protein
DolZOral124_scaffold_4904_4
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3283..3723
DNA (441bp) protein (147aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=177439 species="Bacteria; Proteobacteria; Deltapr
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AJV6_DESPS
peptidyl-prolyl cis-trans isomerase (FKBP-type)
DolZOral124_scaffold_4904_5
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3806..6670
DNA (2865bp) protein (955aa)
Molecular chaperone {ECO:0000313|EMBL:KJR96774.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c
CheA signal transduction histidine kinase id=1701986 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
chemotaxis protein histidine kinase-like protein
DolZOral124_scaffold_4904_6
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6711..7160
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YAG7_9BACT
purine-binding chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=GWB2_Desulfobacterales_56_26_curated
purine-binding chemotaxis protein CheW
DolZOral124_scaffold_4904_7
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7164..8258
DNA (1095bp) protein (365aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1629713 species="Bacteria; Proteobacteria; Delta
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=uncultured bacterium RepID=K1YNZ7_9BACT
CheY-like receiver and methylesterase domain-containing chemotaxis response regulator
DolZOral124_scaffold_4904_8
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8268..9098
DNA (831bp) protein (277aa)
Related to chemotaxis protein methyltransferase CheR id=1701989 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
methylase of chemotaxis methyl-accepting protein Tax=GWB2_Desulfobacterales_56_26_curated
methylase of chemotaxis methyl-accepting protein
DolZOral124_scaffold_4904_9
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9113..9691
DNA (579bp) protein (193aa)
Response regulator receiver protein {ECO:0000313|EMBL:KJR96770.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae
Response regulator receiver protein id=1701990 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
DolZOral124_scaffold_4904_10

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9925..10203
DNA (279bp) protein (93aa)
Protein containing DUF497 n=1 Tax=mine drainage metagenome RepID=T1A272_9ZZZZ
Protein containing DUF497 {ECO:0000313|EMBL:EQD54631.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
DolZOral124_scaffold_4904_11
unknown

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10166..10513
DNA (348bp) protein (116aa)

This feature has no annotations

DolZOral124_scaffold_4904_12
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10827..11720)
DNA (894bp) protein (298aa)
Pentapeptide repeat protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJT1_DESPD
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ADW17572.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobul
DolZOral124_scaffold_4904_13

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comp(11717..12265)
DNA (549bp) protein (183aa)
Nuclease n=1 Tax=uncultured bacterium RepID=K1YP00_9BACT
Nuclease {ECO:0000313|EMBL:EKD34243.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nuclease
DolZOral124_scaffold_4904_14
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12363..12863
DNA (501bp) protein (167aa)
Putative transcriptional regulator, Crp/Fnr family id=1701993 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
cyclic nucleotide-binding protein Tax=GWB2_Desulfobacterales_56_26_curated
cyclic nucleotide-binding protein
DolZOral124_scaffold_4904_15
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12876..14336
DNA (1461bp) protein (487aa)
Related to two-component system response regulator (Ntr family) id=1701994 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator Tax=GWB2_Desulfobacterales_56_26_curated
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
DolZOral124_scaffold_4904_16
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(14342..14785)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4U7_LEPCP
hypothetical protein Tax=CG_Proteo_01
hypothetical protein
DolZOral124_scaffold_4904_17
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14835..15422)
DNA (588bp) protein (196aa)
Conserved hypothetical ATP binding protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4U6_LEPCP
ATP-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ATP-binding protein
DolZOral124_scaffold_4904_18
unknown

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comp(15557..16243)
DNA (687bp) protein (229aa)

This feature has no annotations

DolZOral124_scaffold_4904_19
Pantoea vagans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16309..16764)
DNA (456bp) protein (152aa)
Uncharacterized protein yegE n=1 Tax=Pantoea vagans (strain C9-1) RepID=D6YQ67_PANVC
hypothetical protein
Uncharacterized protein yegE {ECO:0000313|EMBL:ADI78150.1}; TaxID=712898 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea vagan
DolZOral124_scaffold_4904_20
unknown

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comp(16733..17107)
DNA (375bp) protein (125aa)

This feature has no annotations

DolZOral124_scaffold_4904_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17123..17494)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVI8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37262.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
Displaying 21 items

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