ggKbase home page

DolZOral124_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 57 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_451_1
unknown

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)

This feature has no annotations

DolZOral124_scaffold_451_2
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

456..1196
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5Y4_DESTA
Uncharacterized protein {ECO:0000313|EMBL:KJS01861.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
hypothetical protein
DolZOral124_scaffold_451_3
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1218..8951
DNA (7734bp) protein (2578aa)
Hemolysin-type calcium-binding region n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CK92_9RHOB rbh
Alkaline phosphatase {ECO:0000313|EMBL:BAQ65934.1}; TaxID=1617448 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
hemolysin-type calcium-binding region
DolZOral124_scaffold_451_4
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9397..10437
DNA (1041bp) protein (347aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QJZ9_DESB2
HsdR family type I site-specific deoxyribonuclease
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:ADK85892.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus
DolZOral124_scaffold_451_5
unknown

Not on your lists

comp(10480..11781)
DNA (1302bp) protein (434aa)

This feature has no annotations

DolZOral124_scaffold_451_6
unknown

Not on your lists

11944..12219
DNA (276bp) protein (92aa)

This feature has no annotations

DolZOral124_scaffold_451_7

Not on your lists

12264..13079
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B30465
Uncharacterized protein {ECO:0000313|EMBL:KKM06853.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
DolZOral124_scaffold_451_8
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13123..13428
DNA (306bp) protein (102aa)
Integrase catalytic region, ISDde3 n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q310V5_DESDG
integrase catalytic subunit, ISDde3
Integrase catalytic region, ISDde3 {ECO:0000313|EMBL:ABB38541.2}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source=
DolZOral124_scaffold_451_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13772..14881
DNA (1110bp) protein (370aa)
Histidine kinase n=1 Tax=Rhizobium sp. CF142 RepID=J1T8N2_9RHIZ
Histidine kinase {ECO:0000313|EMBL:EJJ28071.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
hypothetical protein
DolZOral124_scaffold_451_10
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14841..15164
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000373E1E2
hypothetical protein
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
DolZOral124_scaffold_451_11
unknown

Not on your lists

15154..15588
DNA (435bp) protein (145aa)

This feature has no annotations

DolZOral124_scaffold_451_12
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15795..16367)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00036ABF82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEA57977.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
DolZOral124_scaffold_451_13
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16974..17942)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QML3_DESAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACN18007.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfoba
DolZOral124_scaffold_451_14
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18366..18665)
DNA (300bp) protein (100aa)
Integrase, integron-type n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NHH6_DESTT
Uncharacterized protein {ECO:0000313|EMBL:KHE92207.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="
integrase, integron-type
DolZOral124_scaffold_451_15
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19119..21146
DNA (2028bp) protein (676aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QMG7_DESAH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACN16484.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfoba
DolZOral124_scaffold_451_16
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21170..21529
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z6A1_9GAMM id=5225701 bin=16ft_combo_ws3_JS1 species=Thiorhodovibrio sp. 970 genus=Thiorhodovibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
DolZOral124_scaffold_451_17
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21526..22590
DNA (1065bp) protein (355aa)
RNA-directed DNA polymerase (reverse transcriptase) (EC:2.7.7.49) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
RNA-directed DNA polymerase (reverse transcriptase) (EC:2.7.7.49)
RNA-directed DNA polymerase n=1 Tax=Mastigocladopsis repens RepID=UPI00030279D6 rbh
DolZOral124_scaffold_451_18
unknown

Not on your lists

22609..22884
DNA (276bp) protein (92aa)

This feature has no annotations

DolZOral124_scaffold_451_19
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22881..25751
DNA (2871bp) protein (957aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QMG6_DESAH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACN16483.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfoba
DolZOral124_scaffold_451_20
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26439..27587)
DNA (1149bp) protein (383aa)
Putative integrase n=1 Tax=Desulfovibrio sp. X2 RepID=S7U3J6_9DELT
Putative integrase {ECO:0000313|EMBL:EPR43550.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio s
hypothetical protein
DolZOral124_scaffold_451_trna_3
unknown

Not on your lists

comp(29742..29812)
DNA (71bp)
transferRNA
DolZOral124_scaffold_451_21
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29959..30804
DNA (846bp) protein (282aa)
TIGR00268 family protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B522_9DELT rbh
TIGR00268 family protein {ECO:0000313|EMBL:EIM64585.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobact
ATP-utilizing protein of the PP-loop superfamily
DolZOral124_scaffold_451_22
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30960..31379)
DNA (420bp) protein (140aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
ndk; nucleoside diphosphate kinase Ndk (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B523_9DELT
DolZOral124_scaffold_451_23
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31551..32162
DNA (612bp) protein (204aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=879212 species="Bacteria; Pr
coaE; dephospho-CoA kinase CoaE (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B524_9DELT rbh
DolZOral124_scaffold_451_24
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32328..33575
DNA (1248bp) protein (416aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=879212 specie
transcription termination factor Rho n=1 Tax=Desulfobacter curvatus RepID=UPI0003769680 rbh
rho2; transcription termination factor rho Rho2
DolZOral124_scaffold_451_25
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33790..34008
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B526_9DELT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae;
rpmE; 50S ribosomal protein L31 RpmE
DolZOral124_scaffold_451_26
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34090..35148
DNA (1059bp) protein (353aa)
Peptide chain release factor 1 n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B527_9DELT rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales;
prfA; peptide chain release factor PrfA
DolZOral124_scaffold_451_27
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35286..36152
DNA (867bp) protein (289aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
hemK; protein methyltransferase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B528_9DELT rbh
DolZOral124_scaffold_451_28
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


36345..37214
DNA (870bp) protein (290aa)
30S ribosomal protein S2 n=1 Tax=Desulfobacter curvatus RepID=UPI00037C6954 rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfo
rpsB; 30S ribosomal protein S2 RpsB
DolZOral124_scaffold_451_29
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37270..37866
DNA (597bp) protein (199aa)
elongation factor Ts n=1 Tax=Desulfobacter curvatus RepID=UPI00035DD155 rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacter
tsf; elongation factor Ts (EF-Ts) Tsf
Displaying items 1-30 of 57 in total

View Taxonomy