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DolZOral124_scaffold_4311

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_4311_1
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..393)
DNA (393bp) protein (131aa)
Smr domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S143_9GAMM
Smr domain protein {ECO:0000313|EMBL:EEB77532.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
hypothetical protein
DolZOral124_scaffold_4311_2
unknown

Not on your lists

comp(593..868)
DNA (276bp) protein (92aa)

This feature has no annotations

DolZOral124_scaffold_4311_3
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(869..2713)
DNA (1845bp) protein (615aa)
Na+/Pi-cotransporter n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMF2_NEPCE
Sodium:phosphate symporter {ECO:0000313|EMBL:AKH20292.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
putative Na+/Pi-cotransporter
DolZOral124_scaffold_4311_4
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3449..5146)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI00036CB97A
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KEQ14702.1}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomon
FAD-dependent oxidoreductase
DolZOral124_scaffold_4311_5
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5470..7122)
DNA (1653bp) protein (551aa)
Methyltransferase domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QMV7_9CYAN rbh
Methyltransferase domain protein {ECO:0000313|EMBL:ERT07746.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
type 11 methyltransferase
DolZOral124_scaffold_4311_6
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7625..8422
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EAS46733.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EAS46733.1};; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="ga
Enoyl-CoA hydratase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YR75_9GAMM
enoyl-CoA hydratase
DolZOral124_scaffold_4311_7
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8776..9522
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S145_9GAMM rbh
Sulfate transporter CysZ {ECO:0000256|HAMAP-Rule:MF_00468}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.
hypothetical protein
DolZOral124_scaffold_4311_8
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9613..10965)
DNA (1353bp) protein (451aa)
ABC1 family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2X9_9GAMM rbh
ABC1 family protein {ECO:0000313|EMBL:EEB76983.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
ubiquinol-cytochrome C reductase
DolZOral124_scaffold_4311_9
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10962..11858)
DNA (897bp) protein (299aa)
Agmatinase {ECO:0000313|EMBL:EEF78555.1}; EC=3.5.3.11 {ECO:0000313|EMBL:EEF78555.1};; TaxID=637616 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methyloph
Agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N932_9GAMM rbh
DolZOral124_scaffold_4311_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11915..13081)
DNA (1167bp) protein (389aa)
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AF09FB rbh
Carboxynorspermidine decarboxylase
DolZOral124_scaffold_4311_11
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13081..14277)
DNA (1197bp) protein (399aa)
Carboxynorspermidine dehydrogenase, putative n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YEJ6_METFJ rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:EWH11073.1}; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum.;" source="Catenovulum ag
catalase
DolZOral124_scaffold_4311_12
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14308..16236)
DNA (1929bp) protein (643aa)
Arginine decarboxylase {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226};; TaxID=1026882 species="Bacteria; Pro
speA; arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SX51_9GAMM rbh
DolZOral124_scaffold_4311_13
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16837..18114
DNA (1278bp) protein (426aa)
transporter n=1 Tax=Teredinibacter turnerae RepID=UPI000379A028
cobalt/zinc/cadmium efflux RND transporter,outermembrane protein
Cobalt/zinc/cadmium efflux RND transporter,outermembrane protein {ECO:0000313|EMBL:AFT67345.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae;
DolZOral124_scaffold_4311_14
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18111..19022
DNA (912bp) protein (304aa)
biotin attachment protein n=1 Tax=Cycloclasticus pugetii RepID=UPI00035D8400
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AFT67346.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticu
DolZOral124_scaffold_4311_15
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19031..22150
DNA (3120bp) protein (1040aa)
cation transporter n=1 Tax=Cycloclasticus pugetii RepID=UPI0003763D01 rbh
Cobalt/zinc/cadmium efflux RND transporter,permease protein {ECO:0000313|EMBL:AFT67347.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycl
cobalt/zinc/cadmium efflux RND transporter,permease protein
DolZOral124_scaffold_4311_16
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22480..22866)
DNA (387bp) protein (129aa)
50S ribosomal protein L17 n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KNX5_9GAMM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.
rplQ; ribosomal protein L17
DolZOral124_scaffold_4311_17
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22929..23933)
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2V1_9GAMM rbh
DolZOral124_scaffold_4311_18
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23974..24594)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2V0_9GAMM rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.
rpsD; 30S ribosomal protein S4
DolZOral124_scaffold_4311_19
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24612..25004)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=2 Tax=unclassified Gammaproteobacteria RepID=A4A662_9GAMM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litora
rpsK; 30S ribosomal protein S11
DolZOral124_scaffold_4311_20
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25076..25432)
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KNX1_9GAMM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
rpsM; 30S ribosomal protein S13
DolZOral124_scaffold_4311_21
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25702..27033)
DNA (1332bp) protein (444aa)
Protein translocase subunit SecY n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2U7_9GAMM rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source=
protein translocase subunit SecY
DolZOral124_scaffold_4311_22
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27034..27480)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=2 Tax=Congregibacter RepID=A4A665_9GAMM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;
LSU ribosomal protein L15P
DolZOral124_scaffold_4311_23
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27484..27666)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z156_9GAMM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;"
LSU ribosomal protein L30P
DolZOral124_scaffold_4311_24
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27684..28196)
DNA (513bp) protein (171aa)
30S ribosomal protein S5 n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2U5_9GAMM rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine
rpsE; 30S ribosomal protein S5
DolZOral124_scaffold_4311_25
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28206..28556)
DNA (351bp) protein (117aa)
50S ribosomal protein L18 n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KNW6_9GAMM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
rplR; 50S ribosomal protein L18
DolZOral124_scaffold_4311_26
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28565..29092)
DNA (528bp) protein (176aa)
50S ribosomal protein L6 n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2U3_9GAMM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine
rplF; 50S ribosomal protein L6
DolZOral124_scaffold_4311_27
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29121..29516)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2U2_9GAMM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.
rpsH; 30S ribosomal protein S8
DolZOral124_scaffold_4311_28
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29530..29835)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NWF0_9GAMM
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
SSU ribosomal protein S14P
DolZOral124_scaffold_4311_29
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29848..30387)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Congregibacter litoralis KT71 RepID=A4A672_9GAMM rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;"
rplE; 50S ribosomal protein L5
DolZOral124_scaffold_4311_30
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30420..30734)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KWH3_9GAMM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis
rplX; 50S ribosomal protein L24
Displaying items 1-30 of 46 in total

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