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DolZOral124_scaffold_75545

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_75545_1
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..148
-----------------
DNA (147bp)
protein (49aa)
50S ribosomal protein L6 n=1 Tax=Methylomicrobium album BG8 RepID=H8GQ26_METAL
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methy
rplF; 50S ribosomal protein L6
DolZOral124_scaffold_75545_2
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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161..514
-----------------
DNA (354bp)
protein (118aa)
50S ribosomal protein L18 n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0EF06
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola p
50S ribosomal protein L18
DolZOral124_scaffold_75545_3
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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524..1027
-----------------
DNA (504bp)
protein (168aa)
30S ribosomal protein S5 n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=RS5_DICNV
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dichelo
DolZOral124_scaffold_75545_4
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1027..1206
-----------------
DNA (180bp)
protein (60aa)
50S ribosomal protein L30 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8W6_9GAMM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydr
rpmD; 50S ribosomal protein L30
DolZOral124_scaffold_75545_5
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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1209..1649
-----------------
DNA (441bp)
protein (147aa)
50S ribosomal protein L15 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJC2_ACCPU
rplO; large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus b
DolZOral124_scaffold_75545_6
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1682..2938
-----------------
DNA (1257bp)
protein (419aa)
Protein translocase subunit SecY n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZCQ9_9GAMM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" sourc
preprotein translocase subunit SecY
DolZOral124_scaffold_75545_7
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2960..3076
-----------------
DNA (117bp)
protein (39aa)
50S ribosomal protein L36 n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X0J9_BACMS
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae
DolZOral124_scaffold_75545_8
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3536..3910
-----------------
DNA (375bp)
protein (125aa)
30S ribosomal protein S11 n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6I3_9GAMM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Card
rpsK; 30S ribosomal protein S11
DolZOral124_scaffold_75545_9
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3928..4200
-----------------
DNA (273bp)
protein (91aa)
30S ribosomal protein S4 n=1 Tax=gamma proteobacterium HIMB30 RepID=UPI000262CF9E
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (
DolZOral124_scaffold_75545_10
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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4161..4421
-----------------
DNA (261bp)
protein (87aa)
30S ribosomal protein S4 n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KL89_SIMAS
Suspect SCG annotation. See neighboring gene [DolZOral124_scaffold_75545_9].
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881
DolZOral124_scaffold_75545_11
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4446..5411
-----------------
DNA (966bp)
protein (322aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6I5_9GAMM
DolZOral124_scaffold_75545_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5453..6178
-----------------
DNA (726bp)
protein (242aa)
50S ribosomal protein L17 n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G029_9SPHI
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sp
rplQ; 50S ribosomal protein L17
Displaying 12 items

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