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DolZOral124_scaffold_211

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Displaying items 1-30 of 80 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_211_1
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97..435)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTC2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIM04730.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
DolZOral124_scaffold_211_2
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

460..1077
DNA (618bp) protein (206aa)
thioredoxin n=1 Tax=Leucothrix mucor RepID=UPI0003B52105
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AIF98389.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas australica.;"
DolZOral124_scaffold_211_3
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1120..1983)
DNA (864bp) protein (288aa)
cysQ; 3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:AAU90880.1}; EC=3.1.3.7 {ECO:0000313|EMBL:AAU90880.1};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Meth
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q602S8_METCA
DolZOral124_scaffold_211_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1996..2562)
DNA (567bp) protein (189aa)
ADP-ribose diphosphatase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003743834
nudE; ADP-ribose diphosphatase NudE
NUDIX hydrolase {ECO:0000313|EMBL:ACL74004.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio s
DolZOral124_scaffold_211_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2582..3244
DNA (663bp) protein (221aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BW64_9GAMM
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EIJ35607.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sourc
HAD-superfamily hydrolase
DolZOral124_scaffold_211_6
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3297..3734)
DNA (438bp) protein (146aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteob
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSS0_SIDLE
D-tyrosyl-tRNA(Tyr) deacylase
DolZOral124_scaffold_211_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3731..4684)
DNA (954bp) protein (318aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae
proline iminopeptidase (EC:3.4.11.5)
proline iminopeptidase n=1 Tax=Leucothrix mucor RepID=UPI0003B51558
DolZOral124_scaffold_211_8
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4694..5500
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037133CD
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000313|EMBL:KFZ90275.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
cell cycle control ATPase
DolZOral124_scaffold_211_9
unknown

Not on your lists

comp(5537..6145)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B48E39
DolZOral124_scaffold_211_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6337..7242
DNA (906bp) protein (302aa)
5'-3' exonuclease, resolvase-like domain-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWG6_9GAMM
5'-3' exonuclease, resolvase-like domain-containing protein {ECO:0000313|EMBL:EIJ35709.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix
5'-3' exonuclease
DolZOral124_scaffold_211_11
unknown

Not on your lists

7390..7713
DNA (324bp) protein (108aa)

This feature has no annotations

DolZOral124_scaffold_211_12
uncultured gamma proteobacterium, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8145..8465
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:AJG37972.1}; TaxID=86473 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium.;"
DolZOral124_scaffold_211_13
uncultured SUP05 cluster bacterium, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8657..9919)
DNA (1263bp) protein (421aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|
6-phosphofructokinase (EC:2.7.1.90)
6-phosphofructokinase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KDQ0_9GAMM rbh
DolZOral124_scaffold_211_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10442..10780)
DNA (339bp) protein (113aa)
Rhodanese-like protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTG6_9GAMM
Rhodanese-like protein {ECO:0000313|EMBL:EIJ34659.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.
rhodanese domain protein
DolZOral124_scaffold_211_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10941..12365
DNA (1425bp) protein (475aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Ga
Peptidase M48 Ste24p n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTG7_9GAMM
peptidase M48 Ste24p
DolZOral124_scaffold_211_16
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12500..14350)
DNA (1851bp) protein (617aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase n=1 Tax=Leucothrix mucor RepID=UPI0003B6CAC0
DolZOral124_scaffold_211_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14653..15864)
DNA (1212bp) protein (404aa)
HemY domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BU93_9GAMM
HemY domain protein {ECO:0000313|EMBL:EIJ34936.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
HemY domain-containing protein
DolZOral124_scaffold_211_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15888..17036)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B5A488
HemX domain protein {ECO:0000313|EMBL:EIJ34937.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
hypothetical protein
DolZOral124_scaffold_211_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17040..17837)
DNA (798bp) protein (266aa)
uroporphyrinogen III synthase n=1 Tax=Leucothrix mucor RepID=UPI0003B5EBB4
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:EIJ34938.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix niv
uroporphyrinogen III synthase HEM4
DolZOral124_scaffold_211_20
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17845..18774)
DNA (930bp) protein (310aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
porphobilinogen deaminase n=1 Tax=Leucothrix mucor RepID=UPI0003B6880C
hemC; porphobilinogen deaminase
DolZOral124_scaffold_211_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18900..19412
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B360CF
Uncharacterized protein {ECO:0000313|EMBL:EIJ35551.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
conserved hypothetical protein
DolZOral124_scaffold_211_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19463..20200)
DNA (738bp) protein (246aa)
chemotaxis protein CheY n=1 Tax=Leucothrix mucor RepID=UPI0003B598A5
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:EIJ35550.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" so
chemotaxis protein CheY
DolZOral124_scaffold_211_23
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20209..21261)
DNA (1053bp) protein (351aa)
histidine kinase n=1 Tax=Leucothrix mucor RepID=UPI0003B3BCAD
Putative signal transduction histidine kinase {ECO:0000313|EMBL:EIJ35549.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Th
histidine kinase
DolZOral124_scaffold_211_24
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21566..22993
DNA (1428bp) protein (476aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argH; argininosuccinate lyase (EC:4.3.2.1)
argininosuccinate lyase n=1 Tax=Leucothrix mucor RepID=UPI0003B32DB9
DolZOral124_scaffold_211_25
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23155..23973)
DNA (819bp) protein (273aa)
zinc transporter n=1 Tax=Leucothrix mucor RepID=UPI0003B57248
membrane protein
Membrane protein {ECO:0000313|EMBL:AHK80026.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira hal
DolZOral124_scaffold_211_26
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23936..24790)
DNA (855bp) protein (285aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichale
zinc ABC transporter ATP-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B36B91
ABC transporter
DolZOral124_scaffold_211_27
Marinomonas posidonica, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24825..25880
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B3D298
heavy metal ABC transporter substrate-binding protein
ABC-type metal ion transporter, periplasmic subunit {ECO:0000313|EMBL:AEF55756.1}; Flags: Precursor;; TaxID=491952 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomona
DolZOral124_scaffold_211_28
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25913..26929)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI00036B3855
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR13133.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" so
DolZOral124_scaffold_211_29
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27031..28443
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003754D6F rbh
DNA photolyase FAD-binding {ECO:0000313|EMBL:EIJ36840.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5
deoxyribodipyrimidine photolyase
DolZOral124_scaffold_211_30
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28614..29684)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00035E671A
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABI57597.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" sour
Displaying items 1-30 of 80 in total

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